Sorghum bicolor (sorghum): 8078046
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Entry
8078046 CDS
T01086
Name
(RefSeq) tRNA dimethylallyltransferase 2 isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00908
Zeatin biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
8078046
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbi01006
]
8078046
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8078046
Enzymes [BR:
sbi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
8078046
Prenyltransferases [BR:
sbi01006
]
Compound prenylation
tRNA dimethylallyltransferase
8078046
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
8078046
Prokaryotic type
8078046
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IPPT
AAA_25
IPT
SF3a60_Prp9_C
AAA_16
AAA_33
Zeta_toxin
nSTAND3
zf-C2H2_jaz
AAA_28
AlkZ-rel
AAA_22
AAA_18
DUF6259
zf-met
Motif
Other DBs
NCBI-GeneID:
8078046
NCBI-ProteinID:
XP_002457015
UniProt:
C5XJC3
LinkDB
All DBs
Position
3:74062908..74065824
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AA seq
469 aa
AA seq
DB search
MADPSAAAAAANPSPGAGEEGAACSPPSPSQRGRGKVVIVMGATGAGKSRLAVDLAAHFA
GVEVVSADSMQLYRGLDVLTNKVPLHEQNGVPHHLLSVIDPSVEFTCHDFRDHAVPIIQE
ILDRGGLPVIVGGTNFYIQSLVSPFLFDDMAEEMHDCTLREHIDDDRGLTNDDEDSGYER
LKDIDPVAAQRIHPNDHRKIKRYLELYATTGSLPSDLFQGEAAKKWGRPSNSRFDCCFLW
VDADLQALDSYVNKRVDCMMDAGLLNEVCNIYDADALYTQGLRQAIGVREFDEFFRLYLP
RQESGEDSSANLLDIHDDQLKSLLDEAVSQLKANTRRLVRRQRRRLHRLGKDFGWNLHHF
DATEAFCCATGDSWQKKVVEPCVDVVKRFLSDDSTVLPSTSASDGVVGSVRGPSRELWTQ
YVCEACDNRVLRGAHEWEQHKQGRGHRKRVQRLKQKSLRPRPLLSQDCN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccctccgccgccgccgccgctgcaaaccctagccctggcgccggcgaggaa
ggagccgcctgctctccgccgtcgccgtctcaaagggggcggggcaaggtggttatcgtt
atgggcgccacgggagccggcaagtcgcggctggccgtcgacctcgcggcccacttcgcc
ggcgtcgaggtggtcagcgccgactccatgcagctctaccgcggcctcgacgtcctcacc
aacaaggtccccctccacgagcagaacggtgttcctcatcatctccttagcgtgattgat
ccctccgttgagttcacttgccatgatttccgcgaccatgccgttccgattatacaggaa
atattggatcgcggtggcctccctgtgattgtcggcggcacaaacttctacatccagagt
cttgttagcccattcctctttgatgatatggcagaagaaatgcacgactgtactttgaga
gaacacatagatgatgatagaggccttaccaatgatgatgaagacagtgggtatgaacgc
ttgaaggatattgatcctgtggctgcgcaaaggatccatccaaacgaccatagaaaaatc
aaacgctacctcgagttgtatgcaacgacaggttccctacccagtgatctttttcaagga
gaggctgctaagaaatggggtcgacctagtaactccagattcgactgttgtttcctgtgg
gtagatgctgatcttcaagctctggatagttatgtcaacaaaagggtcgattgcatgatg
gatgctggcctgctgaatgaagtatgcaacatatatgatgcagatgctctttatacccaa
gggctgcggcaggccattggggttcgtgaatttgacgagtttttcagactatatttacca
agacaagaatctggtgaggattcttctgcaaacttgttagatatacatgacgatcagctt
aagagcttgttggatgaagctgtttcccagctgaaggcaaacactcgcagattagttcga
cgtcaaagacgaagactgcaccgactgggtaaagattttgggtggaatttgcatcacttt
gatgcaactgaagcattctgctgtgccactggggactcgtggcaaaagaaagttgttgaa
ccttgtgtggatgtcgtaaaaaggttcttgtccgatgattcaactgttttaccaagcacg
agcgcctcagatggtgtggttgggagcgtaaggggcccgtcaagagagctgtggacacaa
tatgtgtgcgaggcctgtgacaaccgggtgcttcgaggggcgcacgagtgggagcagcac
aagcaagggcgaggtcaccggaagcgagtgcagcgcctgaagcagaagagcctgaggcca
cggccattgctgtcgcaagactgcaactga
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