KEGG   Sorghum bicolor (sorghum): 8078056
Entry
8078056           CDS       T01086                                 
Name
(RefSeq) protein FIZZY-RELATED 3
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8078056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8078056
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     8078056
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_EML EIF3I WDR55 Beta-prop_IFT140_1st Beta-prop_Aladin WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_HPS5 MIOS_WD40 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_WDR41 Aldo_ket_red NBCH_WD40 WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_SPT8 Tricorn_2nd Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 8078056
NCBI-ProteinID: XP_002457025
UniProt: A0A921RJ14 C5XJE3
LinkDB
Position
3:74252297..74256000
AA seq 482 aa
MTLAAPASDAKPRLNVPPSMAAALRLDPVGLGAGPSTPSPSRRLAEPPKTPSPSKTTYSD
RFIPCRSSSRLQNFALLDSPLSPAKDDTPYSRLLRAELFGPDSPKPATAASASPNTNLFR
FKKDHSAPTSPFAKAAAAHHDCTAGSGDAPSPQKPPRKVPKTPHKVLDAPSLQDDFYLNL
VDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPRDSVCAVHWSREGSYLSIGTGLGDV
QIWDSSRCKRIRNMGGHQTRTGVLAWSSCILSSGSRDKNILQHDIRVPSDYISKFCGHRS
EVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLQLTEHTAAVKAIAWSPHQQGLLASG
GGTADRCIRFWNTANGNVLNSIDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMS
KVATLTGHTMRVLYLASSPDGQTIVTGAGDETLRFWNIFPSVKTQTPVRDIGLWSFSRSH
IR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgacgctcgcggcgccggcctcggacgccaagccgcgcctcaacgtgccgccgtccatg
gcggccgcgctccgcctcgaccccgtggggctgggggcggggccctcgacgccgtccccc
tcccgccgcctcgccgagcctcccaagacgccctccccgtccaagaccacctacagcgac
cgcttcatcccctgccgctcctcctcccgcctccagaacttcgcgctcctcgactcccct
ctctccccggccaaggacgacacgccctactcccgcctcctccgagccgagctcttcggc
cccgattcgcccaaacccgccaccgcagcatccgcctcgcccaacaccaacctcttccgc
ttcaagaaagaccactccgcgcccacctcccccttcgccaaagccgccgccgcgcaccat
gactgcaccgcgggctccggagatgcgccgtcgccgcagaagccacccaggaaggtcccc
aagacgccgcataaggttctggacgcgccctccctgcaggacgacttctacctcaacctt
gtcgactggtcctcgcagaacgtgctcgccgtcggcctaggcacctgcgtctatctctgg
tccgcgtccaatagcaaggtcaccaagctctgcgatttggggcccagggacagtgtctgc
gccgtgcattggtcacgcgaaggctcttatctttccattggcaccggccttggagatgtc
cagatttgggacagttctcgctgtaaacggattagaaatatgggaggtcaccaaacacgg
actggggtattagcatggagctcatgcatcttgtcctcaggtagcagggacaagaatata
ttgcagcatgacatccgtgtccccagtgactatatcagcaagttttgtggtcatagatca
gaggtttgtggactcaaatggtcgcatgacgaccgcgagcttgcctcgggtggaaatgac
aaccagttattagtgtggaaccaacgatcgcaacagccagtgttgcagttgacagaacat
acagccgctgttaaagcaatagcgtggtcgccacatcagcaaggactcctggcatcagga
ggtggaacagctgatagatgcatcaggttttggaacacggctaatggaaatgttctgaac
tcaattgacacaggcagccaggtttgcaaccttgcctggtgtaaaaatgtgaatgagctt
gtgagcacacatgggtattcccaaaatcaaatcatggtgtggaaatatccatccatgtca
aaggttgcaactctaaccggacatacaatgcgtgtgctttaccttgcatcgtcgcctgat
ggacagaccatagtaacaggagcaggcgacgaaactctacggttctggaacatatttcca
tcagttaaaacgcagacccctgtgcgtgatattgggctctggtcattctcaagaagccac
atccggtga

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