Sorghum bicolor (sorghum): 8078357
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Entry
8078357 CDS
T01086
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8078357
03021 Transcription machinery [BR:
sbi03021
]
8078357
Transcription factors [BR:
sbi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
8078357
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
8078357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
KRAB
YABBY
Motif
Other DBs
NCBI-GeneID:
8078357
NCBI-ProteinID:
XP_002453635
UniProt:
C5XZH3
LinkDB
All DBs
Position
4:complement(12014626..12016995)
Genome browser
AA seq
488 aa
AA seq
DB search
MATAAAAGSKRGGARGRKALVAVLDNEANISAGKAAAQAADLSASSAQKKAKRAPARTKA
AVAASAVVDDVAELQGMLERLRLEKEKAEEMVRERDEVIRKKEEEIETKEKEQGRLQAEL
RKVQRAKEFKPTVSLPLVKSLLEKDQDADDKGKKKKGKGKAGPERKKPCPAYVLWLKDQW
TEVKEENPEADFKEVSSTLGTKWKALSAEEKQPYEERYRQEKEAYLQVVGQEKREAEAMK
LLEEQQMQWTAKELLDQYLKFRQEAEEEGDSKKGKRKNSKKDKDPSKPKQPMSAYFVYSQ
ERRAALVAEKKNVPEIGKITGEEWKNMTEAQKAPYEKVARKQKEEYQKQMEVYKQKKIEE
AASLEKEEEEHKKIMKQEALQLLKKKEKADNIIKKTKENRQKKKQENADPNRPKRPASSF
LLFSKEARKQLLEERPGINNSSLNALISVKWKELSGEERQAWNAKAAPAMAAYKKEMEEY
TKAQSSSD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccgccgcggcagggagcaagaggggcggcgcccggggccgcaaggcgctc
gtggccgtgctcgacaacgaggccaacatctccgccgggaaggccgctgcgcaggccgcc
gacctctcggcctcctccgcgcagaagaaggcgaagcgggcgccggcaaggaccaaggcc
gccgtcgcggcgtcggcggtcgtggacgacgtcgccgagctgcaggggatgctggagcgc
ctgcggctggagaaggagaaggcggaggagatggtgagggagcgggacgaggtcatccgg
aagaaggaggaggagatcgagaccaaagagaaggagcaggggcgcctccaggccgagctc
aggaaggtgcagcgcgccaaggagttcaagcccaccgtgagcttgcccctcgtcaagtcg
ttgctggagaaagaccaggacgcagacgacaaaggcaagaagaagaaggggaagggcaag
gccggccccgagaggaagaagccctgcccggcgtacgtgctctggctcaaggaccagtgg
accgaggtcaaagaggagaaccctgaggccgacttcaaggaggtgtccagcacgctgggc
accaagtggaaggcactgagcgccgaggagaagcagccctacgaggagcggtaccgccag
gagaaggaggcctacctgcaggtggtcggccaggagaagcgcgaggccgaggcgatgaag
cttctcgaggagcagcagatgcagtggaccgccaaggagctgctggatcagtacctcaag
ttcaggcaggaggccgaggaggagggcgacagcaagaaagggaagaggaagaacagcaag
aaggacaaggacccctctaagcccaagcagcccatgtctgcctacttcgtgtactcgcag
gagaggcgtgccgcgctggttgcggagaagaagaacgtacctgagattggcaagatcacc
ggggaagagtggaagaacatgacagaagctcagaaggctccctatgagaaggttgcgagg
aagcagaaggaagagtaccagaagcagatggaggtgtacaagcagaagaagattgaggaa
gctgcgagccttgagaaggaagaggaggagcataagaaaatcatgaagcaagaggctctc
cagctgctcaagaagaaggagaaggcagataatatcatcaagaaaaccaaagaaaaccgc
cagaagaagaagcaggagaacgctgatcccaaccggcccaagaggccagcctcttccttc
cttcttttcagcaaggaagcgaggaagcagctgcttgaggaacgcccgggcatcaataac
tcgtccctgaacgcactcatctcggtgaagtggaaggagctgagcggcgaggagaggcag
gcctggaatgcaaaggccgcgcctgccatggctgcatacaagaaggagatggaggagtac
accaaggctcaaagctcctctgattga
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integrated database retrieval system