Sorghum bicolor (sorghum): 8078362
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Entry
8078362 CDS
T01086
Name
(RefSeq) nuclear ribonuclease Z isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8078362
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
8078362
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
8078362
Prokaryotic type
8078362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
8078362
NCBI-ProteinID:
XP_021315691
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All DBs
Position
4:complement(12248767..12251416)
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AA seq
308 aa
AA seq
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MAKSGESTVEVASSSSSPLTPASASATRPKAKHRMEIEGYPVDGVSIGGQETCVIFPTLS
LAFDIGRCPQRAVSQEFLFVSHGHLDHIGGLPMYVATRGLFRLRPPTIFVPACLRELVER
LFEVHRAIDQSELNHNLVPLEVGEEYEFRRDLKVRAFRTYHTIPSQGYVIYSVKQKLKQE
FIGLPGSEIKHLKLSGVEITNTVSTPEIAFTGDTTADFILDPDNADVLQAKILVVESTFL
DDSISVEHAREYGHTHLYEIASQSDKLGNKAILLIHFSARYTTEEIDAAINRLPPSFRSR
VYALKEGF
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcggcgagtccacggtggaggttgcgtcctccagctcctctcctcttact
cccgcttccgcgtcggctacgaggccgaaggcgaagcaccgtatggagatcgaggggtac
ccagtggatggcgtctccatcggcggccaagagacctgcgtcatcttcccgacgctgagc
ctcgccttcgacatcggccggtgcccgcagcgtgccgtctcgcaggagttcctcttcgtc
tcccacgggcacctcgaccacatcgggggccttcccatgtacgtggccacgcgggggctc
ttcaggttgcgtccgcccaccatcttcgtcccggcgtgcctccgggaactcgtggagcgg
ctcttcgaggtgcaccgcgccatagaccagtccgagctcaaccacaacctggtccccctc
gaggtcggggaggagtacgagttcaggagggacctcaaggtcagggctttcaggacctac
cacaccatacccagccaggggtatgtgatatactcggtgaagcagaagcttaagcaggag
ttcattggcctaccagggagcgagatcaagcacctcaagctatcaggtgtggagatcacg
aatacagtgtccacccctgaaattgctttcacgggagatacaacagcagatttcattctt
gatccggataatgcagatgtgctgcaggcaaaaattcttgttgtcgagagtacttttcta
gacgactccatttcagttgagcatgcaagagaatatgggcacacacatttatatgagata
gcaagtcagtcagacaagcttggaaacaaagctattctactgatccacttttctgctcgt
tatactacagaggaaattgatgctgcaataaacagattgccaccatctttccgtagcaga
gtttatgccttaaaggaaggcttctaa
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