Sorghum bicolor (sorghum): 8078373
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Entry
8078373 CDS
T01086
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-1 isoform X1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8078373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8078373
Spliceosome [BR:
sbi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
8078373
Complex B
8078373
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
8078373
NCBI-ProteinID:
XP_002453652
UniProt:
C5XZK6
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All DBs
Position
4:complement(12483421..12486801)
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AA seq
231 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQAGAPFNQHMLTFPGAVARPRLPILPTPGMPHGFPQAPGAPLMPGVRPPILPAPGI
PGYPGGPPTMLQPGAPPGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLPRPPTLPPPTSGV
PGAPIPNSAAPPAIYQTNPPAPAGPTSGAPPAPPTAPQPAFSYAQPSEGNH
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgactactgtgacacctacctgacccatgactcgccatctgtc
cggaagcaacacaacgctggatacaaacacaaggcgaatgttcgaacctactatcagcaa
tttgaggagcagcaaactcaaagtttaattgatcaaagaatcaaggagcatcttggacaa
gctgcagctttccaggcaggtgcccctttcaaccaacatatgctcacattcccaggagct
gtggcccgtcctcgtcttccaattctgccaacccctggcatgcctcatggattccctcaa
gcacctggtgccccattgatgccaggagttagacctccgattttaccagctccaggtatt
ccaggttatcctggtggtccaccaaccatgctgcaaccaggcgccccacctggctccatg
ccacaaccaggcgccccacctggctccatgccacaaccgggcgctccacctggttctatg
ccgatgcagatggccccactcccaaggcctccaacgttaccgcctccaacatctggagtc
ccaggtgcccccattcctaacagtgcagcacctccagcaatttaccaaacgaatccacca
gcacctgcaggtccgacttctggtgctcctccagctccaccaactgctccacagcctgcg
ttctcctatgcgcagccatcagagggcaaccactga
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