KEGG   Sorghum bicolor (sorghum): 8078655
Entry
8078655           CDS       T01086                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03082  ATP-dependent chromatin remodeling
sbi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    8078655
   03083 Polycomb repressive complex
    8078655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbi03036]
    8078655
Enzymes [BR:sbi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     8078655
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     8078655
   HDAC complexes
    Sin3A-HDAC complex
     8078655
    BRAF-HDAC complex
     8078655
    REST complex
     8078655
    SHIP complex
     8078655
    MiDAC complex
     8078655
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     8078655
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    8078655
  Chromatin remodeling factors
   NuRD complex
    8078655
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 8078655
NCBI-ProteinID: XP_002458054
UniProt: A0A921UQR1 A0A1W0VY79
LinkDB
Position
3:complement(52802297..52806221)
AA seq 467 aa
MDTSGNSLPSPSCPDGKKREVCYYYDAGIASVDYGEDHSMVPRRVDMAHALVRSYGLLHD
MRRLRTRPATVTEITGDFHEPDYVRLLQNLTPESFYAGGATMSAAKAHNIGVLKEGETFY
DNPPIAGLWDYCQRYAGGSLAAARALGEGKADIAINWSGGMHHACKAAASGFCFVNDIVL
AIKDLLHHFRRVLYVDIDVHHGDGVETAFLDSNRVMTVSFHQRTKNFFPEERGHVNHVGE
GAGLYRALNVPFMEGVGDEGYCEMFKAIMKRVVDVFQPEAIVMQCGSDSLSGDRLGQLNL
SIAGHAQCVSYMRSFNLPLLLLGGGGYTVNHVAACWCYETAVAIGKEIDDNIPVHCYDTY
YSGQGYKLHYPVDKQLKNENKRSYLERTMTAVLENLSHLEAAPSVQFQDPPGPGGSGSTN
TEPLFYEQAPREDDDPMERLHRLCGERDERCFFRELGKKRQLANFFA
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggacacgagcggcaactcgctgccgtccccgtcgtgccccgacggcaagaagcgggag
gtgtgctactactacgacgccggcatcgccagcgtcgactacggcgaggaccacagcatg
gtgccccgccgagtcgacatggcgcacgcgctcgtccgctcctacggcctgctccacgac
atgaggcgtcttcgcacgaggcccgccaccgtcacggagattaccggagactttcatgag
cccgactacgttcgtttgctgcagaacctcaccccggagagcttctacgccggcggcgcc
accatgagcgcagcgaaggcgcacaatataggcgtgctcaaggaaggcgagactttctac
gacaaccctcccatcgccggcctctgggactactgccagcgctacgccggcgggtcgctg
gccgcggcgcgcgcgctcggcgaaggcaaagccgacatcgccatcaactggtccggcggc
atgcaccacgcgtgcaaagcggcggccagcggcttctgcttcgtcaacgacatcgtgctc
gccatcaaggacctcctccaccacttcaggcgcgtgctgtacgtcgacatcgacgtccac
cacggcgacggcgtcgagacggccttcctcgactccaaccgtgtgatgacagtgtcgttc
caccagcgcaccaagaatttcttcccggaggaaaggggacacgtcaaccacgtcggcgaa
ggggccggtctgtaccgtgctttgaacgtgccgttcatggagggcgtcggcgacgagggg
tactgcgagatgttcaaggccatcatgaaaagggtcgtcgacgtgttccagccggaggcc
atcgtgatgcagtgcggcagcgactcgctctccggcgacaggctcggccagcttaacctg
tccatcgccggccacgcccagtgcgtcagctacatgcggagcttcaacttgccgctgctc
cttctcggcggcggcggatacaccgtcaaccacgtcgccgcctgctggtgctacgagacg
gcggtggccatcggcaaggagatcgacgacaacataccggtgcactgctacgacacctac
tacagtggccaaggctacaagctccattacccggtggacaagcaactcaagaacgaaaac
aagagaagctacctagaacgcacgatgaccgcggtcctagagaacctctcccatctcgag
gcggcgccgagcgtgcagttccaggatccgcccgggcccggcggaagcggaagcaccaat
accgagccgctattctacgaacaggccccgcgagaagacgacgaccccatggagaggctg
catcggctttgtggcgagagggacgagcgctgcttcttcagagagttgggaaagaagcga
cagttggcaaatttttttgcgtga

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