Sorghum bicolor (sorghum): 8078788
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Entry
8078788 CDS
T01086
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03020
RNA polymerase
sbi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8078788
09124 Replication and repair
03420 Nucleotide excision repair
8078788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8078788
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8078788
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8078788
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
8078788
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8078788
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
8078788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
8078788
NCBI-ProteinID:
XP_002457245
UniProt:
A0A921RAQ5
C5XMS5
LinkDB
All DBs
Position
3:complement(4151625..4154063)
Genome browser
AA seq
177 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR
EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAAV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgttcttccacatcgtgctggagcggaacatgcagctgcacccgcggcacttcgggccg
cacctccgcgacaagctcgtctccaagctcatcaaggacgtcgagggcacctgcagcggg
cggcacgggttcgtggtggcgatcacgggtgtggaggacatcggcaaggggctcatccga
gaaggcacgggatacgtcaccttccccgtcaagtaccagtgcgtcgtcttcagacccttc
aagggcgagatcctcgaggctgtcgtcaccatggtgaacaagatgggcttctttgcggag
gctgggccggtgcagatctttgtgtccaaccacttgattccagacgatatggagttccaa
tcgggagatgtgccaaactacacaacttctgatggatcggtgaaaattcaaaaagagagt
gaggtgcggctgaagattattggtactcgtgttgatgctacagaaattttttgcattggc
acaataaaggatgacttcctgggtgttatcagcgatcctggtgcagcagtgtaa
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integrated database retrieval system
