Sorghum bicolor (sorghum): 8078866
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Entry
8078866 CDS
T01086
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8078866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8078866
03041 Spliceosome [BR:
sbi03041
]
8078866
03032 DNA replication proteins [BR:
sbi03032
]
8078866
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
8078866
Spliceosome [BR:
sbi03041
]
Complex A
U1 snRNP components
Sm proteins
8078866
U2 snRNP components
8078866
Complex B
U1 snRNP components
8078866
U4/U6.U5 tri-snRNP components
8078866
Complex C
U2 snRNP components
8078866
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
8078866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6897
Motif
Other DBs
NCBI-GeneID:
8078866
NCBI-ProteinID:
XP_002468194
UniProt:
C5WRK4
A0A921S5Q5
LinkDB
All DBs
Position
1:complement(71884471..71888567)
Genome browser
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGVGRGRAVAMRARAAAGRGGG
PVGRGSAPPVRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcctagggatcccggtgaagctgctccatgaggcagcgggtcatgtggtg
acggtggagctcaagaccggcgaagtgtaccggggggccatggtcgagtgcgaggataac
tggaattgccagctcgaaaacatcaccttcaccgccaaggatgggaaggtgtcgcagctg
gagcacgtcttcatcagaggaagcagagtgagatttatgattatacctgatatgcttaag
aacgctcctatgttcaagcgcttggaagcgaggattaggggcaaaggatcggctattgga
gttggccgtggacgtgctgttgcaatgcgtgctcgggctgctgctggtcgtggtggtggt
cctgttggccgaggcagcgcacctcctgtgaggaggtag
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