Sorghum bicolor (sorghum): 8078887
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Entry
8078887 CDS
T01086
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-T1-2
KO
K15188
cyclin T
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
8078887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8078887
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
8078887
Brd4/P-TEFb complex
8078887
7SK RNP complex
8078887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
TFIIB
Cyclin_C
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
8078887
NCBI-ProteinID:
XP_002452851
UniProt:
C5XS55
LinkDB
All DBs
Position
4:64118794..64125501
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AA seq
702 aa
AA seq
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MYPEINAWPKPSTLRPCFCSLASFSRALYLFLVATTWRSPPCPALYFGTFAGDEHPPGCF
AKLATSRIQLIKVPSTLSGFRGGCREPIQQGVSDILMDGASNILEKSSHECMQSWYFTRE
ELEKFSPSRKDGITENKESEIRHLYCSFIRDVGIRLKLPQMTLATAVMLCHRFYLHQSLA
KNGWQTVATVCVFLASKVEDTPCPLDYVVRVAYETMYRRDTAAAQRIRQKDVFEKQKALI
LIGERLLLTTIRFDFNIQHPYRPLFDAMQNLGINQKEVKQVAWNFVNDWLKTTLCLQYKP
QYIAAGSLYLAAKLHNIKLPLHGAQVWWHQFDVAPKPLEAVIHQMMELTAVKKLMPARPN
PVKLKETLCEAKLSLSNSPDSVLNQSSLLISSSSPDIGEPDQVQVDSCQYLISSHTGDCR
VSGPDSSLLNTCANRNVSCKAHDEESLDQALITKHDNGMMSSSNQTSLDATIGTEGSAMK
QDVSHCNDFNIRVNDESLNQVSRNQHGGVPLPDVVSLDAKVDKESSRCVEPLIANSSCCT
DSVNVDSLCPDQRLAVAASGPTDDAPSVLLAKVESDPLSAKLENIDVARIKGLLMKRKSR
REIQEQAIALDGLSEEAWIERELETGIVTKQEANCAAISDELSDEAWIERELESGIVVGP
RNEQAITFDGLSENDWIERELESGIIVEPAPAIKKRRLESRC
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtacccagagattaatgcatggcccaaaccttctaccctgcggccttgcttctgttct
ctcgcgtcgttctcccgtgcgctctatctgtttctggtggcgacgacttggcggtcgccg
ccgtgcccagccctctatttcgggaccttcgccggcgacgagcacccaccaggttgcttt
gcaaaacttgcaacgtccaggatacaactaattaaggttccttcaaccttatctggattt
agaggaggttgcagagagcccatccagcagggtgtctcagacatactgatggatggggca
tccaacatccttgagaaatcgtcacatgaatgcatgcagtcttggtacttcaccagggaa
gaactagagaaattttctccatcaaggaaagatggtattactgaaaacaaggagtcagaa
attcggcatttatattgttcatttatccgggatgtcggcatcaggctgaagctacctcag
atgactctagcaacagcagtcatgctttgccatcgtttctatttacatcagtcccttgcc
aaaaatggatggcagacagttgcaacagtatgtgtatttctggcgtcgaaagttgaagat
actccttgccccctggactatgtagttagagtagcctatgaaacaatgtataggcgggac
actgctgcggctcaaaggatccgccagaaggatgtttttgagaagcagaaagcgctcatt
ttgattggagagagattgcttcttacaactattcgatttgatttcaacattcagcatcct
tatagaccactttttgatgctatgcaaaatcttggcatcaatcaaaaagaagtgaaacaa
gtagcatggaactttgtgaatgactggcttaaaacaacattgtgcctacagtataaaccc
cagtacatagctgctggttccctttacctggctgcaaagcttcacaatatcaagcttcct
ttgcatggagcgcaagtttggtggcaccaatttgatgttgccccaaagccgctggaagct
gtcattcatcaaatgatggagcttacggctgtgaaaaaattgatgcctgctcgtcccaat
ccggttaagctaaaggaaactttatgtgaagctaaactgagcttatctaatagcccagac
tctgtgttgaatcaatcaagcttgttaataagcagctcaagtcctgatattggcgagcct
gaccaagtgcaggtggattcctgtcaatacttgataagcagtcacacgggtgattgtaga
gtctcaggtcctgacagcagtttgttgaatacttgtgctaatagaaatgtttcttgtaaa
gcacatgatgaagagagcttggatcaggccttaataaccaaacatgacaatgggatgatg
tcttctagtaatcagacatcgttagatgctactataggcactgagggcagtgctatgaag
caggatgtaagccattgtaatgacttcaatatcagagtcaatgacgaaagcttgaaccag
gtgtcaagaaatcagcatggtggtgtcccattacctgacgtggtatcactggatgccaag
gtggacaaggaaagcagtcggtgtgtggaaccattgattgcaaactccagttgctgtact
gacagtgttaatgtggatagcttatgccctgatcaaagattggctgttgctgcttcaggc
cctacagatgatgcaccatccgtgcttctggccaaggtggagtctgatcctttgagtgca
aagcttgaaaatattgatgttgccaggataaaaggtttattgatgaagaggaagagccgg
agagagatccaagagcaagccattgctttagatggcctcagtgaagaagcctggattgag
agagagcttgagactgggattgttacaaaacaagaagccaattgtgctgccatctcagat
gaactaagtgatgaagcctggattgagagagagctcgagtcagggattgtggtaggacca
agaaatgagcaggcaatcacttttgatggtttgagtgaaaatgattggattgagagggag
cttgagtctgggatcatcgttgagccagcacctgctatcaagaagcggaggctggagtcg
aggtgttag
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