Sorghum bicolor (sorghum): 8078964
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Entry
8078964 CDS
T01086
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8078964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8078964
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
8078964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
8078964
NCBI-ProteinID:
XP_002460931
UniProt:
C5XCH7
A0A921RTQ3
LinkDB
All DBs
Position
2:71848861..71854809
Genome browser
AA seq
471 aa
AA seq
DB search
MEADSGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIA
ERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPGRTRKIFVGGLASNVTEV
EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR
AVPKEQSPGPIARSPVGGQNYAMSRVHNFLNGFNQGYNPNPLGGYGMRVDGRYGLLTGAR
NGFSSFGPGYGMGMNVEGGMSGYFGASSGFVNSSNGRQIGSYFNGSSNRLGSPIGYVGLN
DDSGSILSSMSRNVWGNGNLNYTGNPTNTNSFAPPGSGGGIPGDEISWGSLTSAHGMGNI
SSLGSGNLGRGTGDHNFGLPSGNYVRSNSTGTIGEPFSASTNAYESNNPGAYGSSSIYGD
STWRFNSSEVDMPPFGHDLGNVDPDIKSEISASYMGNYTVNNNQTSRGITS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgactccgggaagctcttcgtcggcggcatctcctgggagacggacgaggac
cgcctccgcgagtacttcggtcgcttcggggaggtcaccgaagccgttatcatgcgggac
cgcaacaccggccgcgcccgtgggttcggcttcgtcgtcttcgccgactccgggatcgcc
gagcgcgtcaccatggacaagcacatgatcgacgggcgcatggtggaagcaaagaaggcc
gttcccagggacgaccagagtattgcgagcaagaacaatggcagcagcatagggtcacct
ggaccaggacgtactaggaagatctttgttggaggtctggcttcaaatgttaccgaggtc
gaattcagaaggtactttgagcaattcggtgtgataaccgatgtggtagtgatgtatgac
cacaacacgcagaggcctaggggctttggtttcatcacttatgactcagaagacgcagtg
gataaggcactgcacaagaacttccatgagctgaatggtaaaatggttgaggtcaagagg
gctgtaccaaaggagcagtctcctggacctattgcacgttcacctgtgggagggcagaac
tatgctatgagcagggttcataacttcctaaatggcttcaaccagggttacaacccgaac
ccccttggtggttatgggatgagggtggatggaaggtatggtctccttacaggtgcacgg
aatgggttctcttcgtttggtccaggttatggaatgggcatgaatgttgaaggtggaatg
agtggatactttggtgcaagttctggttttgtcaatagttccaatgggcggcaaataggt
tcttacttcaatggtagttcaaacagattaggtagtccaattgggtatgttggccttaat
gatgattcaggatcaatactaagttcaatgtctagaaatgtctggggtaatggaaatctg
aactacacaggcaaccctacaaacacgaattcttttgctccacctggaagtggtgggggc
attcctggtgatgaaattagttggggaagccttacttctgctcatgggatgggcaacatt
tcaagccttggatcgggaaaccttggccgtggaaccggagatcacaactttggtttgcct
tctggaaactatgtgaggagcaactcaactggtacaattggtgagccattttctgcatca
accaatgcatatgaatcgaacaatccaggtgcatatggcagcagctctatttatggtgac
tcaacctggaggtttaactcatctgaggttgatatgcctccttttggtcatgatcttgga
aatgttgatccggatatcaaatcagaaatatcagcaagctacatgggcaactatactgtt
aataataatcagacaagcagaggtatcacttcctag
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