Sorghum bicolor (sorghum): 8079030
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Entry
8079030 CDS
T01086
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8079030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8079030
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8079030
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8079030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
8079030
NCBI-ProteinID:
XP_021311770
LinkDB
All DBs
Position
3:7944673..7945916
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AA seq
266 aa
AA seq
DB search
LVGQCKNGHVVCDPCRVRIHGTCPSCRNPVGEIRCRALEKAIADMVLPCAFSRHGCTQLL
KHKERQDHEALCHYAPFVCPFQGCAYSVESTLLLHDHILDTHAINNVVSLVGSTQVVLHW
STPFEVLLDPVDRCVFLLLNGGDVPSGRSLSVVCLGPRPMANQLLEYKLKVGGAGEPGAL
SLSASGSVPCMRRWAGQHPNDGFLFVPNAYWTSFSCVLVNVRVQKSAVDSLVRCFKHASL
ETFNLLVLVFVCLAMALVLAWKTIYR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttggttggccagtgcaagaacgggcacgttgtgtgcgatccctgccgcgttcgcatccac
gggacttgcccgtcctgccgcaatccggttggcgagatcaggtgccgagcgctggagaag
gccatcgccgacatggtcctcccctgcgcgttcagcagacacgggtgcacgcagctgctc
aagcacaaggagaggcaggaccatgaggcgctttgccattatgcaccattcgtgtgcccg
ttccagggttgcgcctactccgtggagtccacgctgctcctccacgaccacatcctagac
actcacgccatcaacaacgtggtcagcttggtcggatccacgcaggtggtgctgcactgg
agcacgccatttgaggtgctcctggacccggtggaccggtgcgtgttcctgctgctcaat
ggcggggacgttccctcaggccggtcgctgtcggtggtctgcctcggcccgcgccccatg
gccaaccagttgctcgagtacaagctgaaggtcggcggcgccggtgaacccggcgcgctc
tcgctgtctgcatcaggctctgtgccctgcatgcgcaggtgggcagggcaacaccctaac
gatgggttcctgttcgtgcctaatgcgtactggacctccttcagctgcgtcctcgtcaac
gtccgtgtccagaagtcggcggtcgacagtttagtacgttgctttaagcacgcctcactg
gaaacattcaatttactggtgttagtttttgtttgcttggcaatggctctcgtgttggca
tggaagacgatctataggtaa
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