Sorghum bicolor (sorghum): 8079064
Help
Entry
8079064 CDS
T01086
Name
(RefSeq) homeobox-leucine zipper protein ROC5
KO
K09338
homeobox-leucine zipper protein
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8079064
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
8079064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
MRP-L20
Motif
Other DBs
NCBI-GeneID:
8079064
NCBI-ProteinID:
XP_002457484
UniProt:
C5XEA6
LinkDB
All DBs
Position
3:complement(8516809..8523785)
Genome browser
AA seq
815 aa
AA seq
DB search
MSFGSLFDGGAGGGGGGGMQFPFSTGFSSSPALSLGLDNAGGGGMVGRMLPGGAGAGAAA
DGGGMMMGRDADAENDSRSGSDHLDAMSAGGAEDEDDAEPGNPRKRKKRYHRHTPQQIQE
LEALFKECPHPDEKQRGELSKRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKL
RAENMAIREAMRSPMCGSCGSPAMLGEVSLEEQHLCIENARLKDELSRVYALATKFLGKP
MSILSAGTMLQPNLSLPMPSSSLELAVGGGLRGLGSIPSAATMPGSMGDFAGGVSSPLGT
VITPARTTGSAPPPMVGIDRSMLLELAISAMDELVKLAQIDEPLWLPSLNGSPNKELLNF
EEYAHSFLPCVGVKPVGYVSEASRESGLVIFDNSLALVETLMDERRWSDMFSCMIAKATV
LEEVTSGIAGSRNGGLLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLV
RDQNSATASNAGNIRCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGL
AFGARRWLAMLQRQCECLAILMSPDTVSANDSSVITQEGKRSMLKLARRMTENFCAGVSA
SSAREWSKLDGAAGSIGEDVRVMARKSVDEPGEPPGVVLSAATSVWVPVAPEKLFNFLRD
EQLRAEWDILSNGGPMQEMANIAKGQEHGNSVSLLRASAMSANQSSMLILQETCTDASGS
MVVYAPVDIPAMQLVMNGGDSTYVALLPSGFAILPDGPSGVGAEHKTGGSLLTVAFQILV
NSQPTAKLTVESVETVNNLISCTIKKIKTALQCDA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgggagcctattcgacggcggggccggcggcggcggcggcggagggatgcag
ttcccgttctcgacaggcttctcgtcctcgccggcgctctccctcggcctggacaacgcc
ggcggcggcggcatggtgggacggatgctccctgggggcgccggcgccggcgccgcggcg
gacggcggcgggatgatgatggggagggacgccgacgccgagaacgacagccggtccggg
agcgaccacctggacgccatgtccgctggcggcgccgaggacgaggacgacgccgagcca
ggcaacccgcgcaagcgcaagaagcgctaccaccgccacacgccgcagcagatccaggag
ctcgaagcgctgttcaaggagtgccctcacccggacgagaagcagcgtggcgagctcagc
aagaggcttggcctcgacccgcgccaggtcaagttctggttccagaaccgccgcacgcag
atgaagacgcaactggagcggcacgagaacgcgcttctcaagcaggagaacgacaagctg
cgcgccgagaacatggcgatccgggaggccatgcgcagcccgatgtgcggcagctgcggg
agccccgccatgcttggggaggtgtcgttggaggagcagcacctgtgcatcgagaatgcg
cggctcaaggacgagctcagccgcgtctacgccctcgccaccaagttcctcggcaagccc
atgtccatcctctcggccgggaccatgctgcagccgaacctgtcgctgcccatgccgagc
tcgtcgctggagctggcggtcggcggcggtctccggggtctagggtctatcccgtctgct
gctaccatgcctggttccatgggcgactttgctgggggcgtgtctagcccattgggcacg
gtgatcacgcctgcacggacgaccggatctgctccaccgcctatggtgggcatcgacagg
tccatgctgttggagcttgcgatcagcgccatggatgaacttgttaagctggcacagatt
gacgagcctttgtggcttcccagcctcaatggctctcccaacaaggagttgctcaacttt
gaggagtatgcccactcgttccttccgtgcgtcggcgtgaagcctgtgggctatgtgtcc
gaggcctctagggagtctggcctcgtcatttttgataacagccttgcccttgttgagacc
ctgatggacgagagacggtggtctgacatgttctcatgcatgattgctaaggccacagtc
ctagaggaggtgacatccggcattgcaggaagtagaaatggtgggctgctgctgatgaag
gctgagctacaagtgctctcacctctagtgcccatcagggaggtcacatttctcaggttt
tgcaagcagctggctgagggtgcatgggcagtagtggacgtgtccatcgatggattggtg
agagatcagaactctgcaacagcatccaacgccggaaatataaggtgcaggaggttgcct
tctggctgtgtgatgcaagacactcccaatggctattgcaaggtcacatgggtcgagcat
acggaatacgatgaggcatcagtacaccagctctatagaccacttctccggtccgggctg
gcctttggggccaggcggtggctcgcaatgctgcagcgccagtgtgaatgcctggccata
ctcatgtcccctgatacagtttcagcaaatgactcgtcagtcataacccaagaggggaag
cgaagcatgctgaagctggcgcggcggatgacggagaacttctgcgctggggtcagcgcg
tcgtctgcacgtgaatggagcaagctggacggtgcggcaggcagcatcggtgaggatgtg
cgggtcatggcacggaagagcgtggacgagcctggggagccaccgggcgtggtgctaagt
gccgccacatcggtgtgggtgcccgtggctccggagaagctcttcaacttcctccgtgac
gagcagctgcgcgcagagtgggacatcctcagcaacggaggccccatgcaggagatggct
aacattgccaaggggcaggagcacgggaactcggtgtccctcctcagagccagtgccatg
agtgccaaccagagcagcatgttgatccttcaggagacttgcactgatgcatcaggttcg
atggtcgtgtacgctccggtggacatcccggcgatgcagctcgtcatgaacggcggggat
tccacctacgttgctctgctgccatctgggtttgccatcctgccggacggtccaagcggt
gtcggcgctgagcataagacaggtggctcgctactcaccgttgccttccagatcctcgtc
aacagccagccgaccgccaagctcaccgtggaatcagtagagaccgtgaacaaccttata
tcctgcaccatcaagaagatcaagacagcgctgcagtgcgacgcttga
DBGET
integrated database retrieval system
