Sorghum bicolor (sorghum): 8079130
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Entry
8079130 CDS
T01086
Name
(RefSeq) 3-ketoacyl-CoA synthase 20
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00062
Fatty acid elongation
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi04626
Plant-pathogen interaction
Module
sbi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
8079130
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8079130
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
8079130
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Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
8079130
NCBI-ProteinID:
XP_002449888
UniProt:
Q9XEP1
A0A921R138
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Position
5:67709502..67711468
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AA seq
532 aa
AA seq
DB search
MSIKSETNERSSTIQSAGHRICSIVKLCYQHLMLAVSYALYLFLAPIILATLVLHLSRHT
SADDDLIVSARSTLTANLPFTVVVVAAAATAVYLMRRPRAVYLLDLACYKPGAEHAVTRE
TFMRLVVGYGTFSDDSLAFQRKILERSGLGQGTYLPKALTSSPPNPCMAEARREAEAVMF
GAVDQLLAKTGVRAGDIGIVVVNSGLFSPTPSLSAMIVHHYKLRRDVSSYNLAGMGCSAS
LISVDLAKQLLQVQRNTYALVVSLEIMAASAYVGNTRSMLVPNCIFRMGGAAVLLTNHGT
ERRRAKYQLLHTVRTHQGADDRAYRCVYQEEDESGHVGVALSKDLMSVAAEALKTNITTL
GPRVLPMSEKMKMMLVGGKAAVVQVLGVQQQGQGGSRSRPYIPDLTTAFEHFCIHAGGRA
VLDTVERSLDLSAWHMEPSRMTLYRWGNTSSSSLWYELAYTEAKGRVRRGHRVCQIAFGS
GFKCNSAVWRALRTIDPAKESAAAGNPWVEEIHRFPVEVPQVERVDVAAMAS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaagtcagaaaccaatgagcgtagcagcacaatccagagcgccggccaccgg
atatgcagcatcgtcaagctgtgctaccaacacctgatgctggcggtctcctacgcactc
tacctcttcctggcgcccatcatccttgccacactcgtgctccacctctcacgacacact
agcgctgacgatgacctcatcgtgtccgcacgctccacgctcaccgctaatctgcccttc
accgtcgtcgtcgtcgccgccgccgccactgccgtctacctcatgcggcggccgcgggcc
gtctacctgctagacttggcgtgctacaagcccggggcggagcacgcggtgacccgggag
acgttcatgcggcttgtcgtcgggtacgggaccttctccgacgacagccttgctttccag
cgcaagatcctggagcggtcgggactggggcaaggaacctacttgcccaaggccctgacc
agctcgccgcccaacccgtgcatggcagaggcccgccgcgaggcggaggctgtcatgttc
ggcgccgtcgaccagttgcttgccaagactggcgtccgcgccggcgacatcgggatcgtc
gtcgtcaacagcggcctcttcagccccacaccgtcgctctctgccatgatcgtccaccac
tacaagctccgccgggacgtttccagctataacctcgccggcatgggctgcagcgctagc
ctcatctccgtcgacctcgccaagcagctgcttcaggtgcagcggaacacctacgctctg
gtcgtgagcctggagatcatggcggccagcgcgtacgtcggcaacacccggtcgatgctc
gtgcccaactgcatcttcaggatgggcggcgccgccgtgctcctgaccaaccacggcacg
gagcggcgccgggccaagtaccagctactgcacacggtacggacgcaccagggcgccgac
gaccgggcgtaccgctgtgtgtaccaagaagaggacgagtccgggcacgtaggggtggcg
ctgtccaaggacctcatgagcgtggctgccgaggcgctcaagaccaacatcacgacgctg
ggaccgcgggtgctgcccatgtcggagaagatgaagatgatgctcgtcggcggcaaggcg
gcggtggtgcaggtgctcggcgtgcagcagcagggccagggcggcagcaggagcaggccc
tatatcccggacttgacgacggcgttcgagcacttctgcatccacgccggcgggagggcg
gtgctggacaccgtggagaggagcctggacctcagcgcgtggcacatggagccgtcacgg
atgacgctctaccggtgggggaacacctccagcagctcgctgtggtatgagctcgcctac
acggaggccaagggacgggtgcggcgcggccaccgcgtgtgccagatcgcctttgggtca
gggttcaagtgcaacagcgctgtgtggcgcgcgctgcgcaccattgatccagccaaggag
agcgccgccgccgggaacccgtgggtggaggagatccacaggttccccgtcgaggtgcct
caggtagagagggtcgacgtcgccgccatggcgtcctga
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