Sorghum bicolor (sorghum): 8079217
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Entry
8079217 CDS
T01086
Name
(RefSeq) transcription elongation factor SPT4 homolog 1
KO
K15171
transcription elongation factor SPT4
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
8079217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8079217
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8079217
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
8079217
RNA polymerase I system
8079217
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
8079217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
8079217
NCBI-ProteinID:
XP_002463206
UniProt:
C5X2I5
A0A921UV95
LinkDB
All DBs
Position
2:complement(73657570..73661002)
Genome browser
AA seq
128 aa
AA seq
DB search
MRGGGGGMMDDEERVGHAEIPTSFGPELRACLRCRLVKTYDQFRQNGCENCPFLEMEREH
DNVVNCTTPNFTGIISLMDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQENNV
QYVPPKRV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggcggcggcgggatgatggacgatgaagagcgggtgggccacgcggagatc
ccgaccagcttcggcccggagctgcgcgcctgcctccgatgccgcctcgtcaagacctac
gaccagttcaggcagaacggctgcgagaactgcccgttcctggagatggagagggagcac
gacaacgtcgtcaactgcaccacccctaacttcaccggaattatctctctgatggatccc
agcaggagttgggcagctcgttggttgagaattggcaggttcattccggggtgctataca
cttgctgtctcggaggagcttccagaagagtatcaggggatttgtcaagagaacaatgtt
cagtatgtgccgcccaagcgtgtctaa
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