Sorghum bicolor (sorghum): 8079246
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Entry
8079246 CDS
T01086
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g16835, mitochondrial
KO
K01455
formamidase [EC:
3.5.1.49
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00460
Cyanoamino acid metabolism
sbi00630
Glyoxylate and dicarboxylate metabolism
sbi00910
Nitrogen metabolism
sbi01100
Metabolic pathways
sbi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
8079246
09102 Energy metabolism
00910 Nitrogen metabolism
8079246
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
8079246
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.49 formamidase
8079246
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Gene cluster
GFIT
Motif
Pfam:
FmdA_AmdA
PPR_2
PPR
PPR_3
PPR_1
E_motif
PPR_long
TPR_19
TPR_17
Motif
Other DBs
NCBI-GeneID:
8079246
NCBI-ProteinID:
XP_002458546
UniProt:
C5XKW7
A0A921RFZ0
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All DBs
Position
3:complement(63598817..63606129)
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AA seq
937 aa
AA seq
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MAADPAGLPPRLRPSTAPPPPAVTRALHTINTCTSAAALAPLRVHILREPALLRSTAVVS
AFFLACGRLRSLDPALVLFASLPRPHVFVFNSLLRSLPAAPACSPLPLFRHFIGLGVRPN
RYTFPLMLTSLSSLHELSAVHSQVAKSGFARDLHVRNALLASYAACDPDLGHAEQLFDEM
PSPDVVAWTTMITAYRNRGRSFHALSTFRRMFAASVAPNRVTMVSALGACAAHGAVDTGI
WIHQYVQKQGWELDVVLGTALVDMYGKCGHVVEGVRVFSEMTERNVCTWNSIIGAFALEQ
NGEMALRWFYRMKADGVRPDAVTLICVLYACTHAGLVDIGRKIFNLIVQGKYGFQPGIKH
FGCMIDLLSRSGHLDDAFRVLEAMPSQPDAVIWGLLLQGCKVRGDTDLSEYVTMRLVELE
PGNASHYVTLANLYAETGRWLEAEEVLKGMKEKGLAKDAGWSLRLEDSLSKYISDENLME
CALNMAPLTPRLVVPIDVKKQPWEQKVPLHNRWHPDIPPVADVTEGELFRVEMVDWTGGR
VRDDNSADDIKFLDLTSTHYLSGPLRIVDSEGVPASPGDLLAVEICNLGPLPGDEWGYTA
IFERENGGGFLTDHFPTARKAIWYFEGIYAYSPQIPGVRFPGLTHPGIVGTAPSVELLNI
WNEREKRLAETSPHTLKLCEVLHQRPLANLPTPENCLLGKIQEGTAEWHKMANEAARTIP
GRENGGNCDIKNLSSGSKVYLPVFVEGANLSTGDMHFSQGDGEVSFCGAIEMSGFLELKC
EIIRGGMKEYLPPVGPTPLHVNPIFEIGPVEPRFSEWLVFEGISVDESGRQHFLDASVAY
KRAVLNAIEYLSRFGYSKEQVYLLLSCCPCEGRISGIVDSPNAVATLAIPTAIFDQDIRP
KHLRGRLRPKLIRLPDLLSCSNNGLPVTQDQSSTRAP
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaccctgctggcctcccgccgcggctccgcccgtccactgcgccgcctcca
cccgccgtcacgcgcgcgctgcacacgatcaacacctgcacctccgccgcggcactcgcg
cccctccgcgtccacatcctccgtgaacccgcgctcctccgctccaccgccgtcgtctcc
gccttcttcctcgcctgcggccgcctccgtagcctcgaccccgcgctcgttctcttcgcc
tccctcccgcggccccacgtcttcgtcttcaactccctcctccgctccctccccgcagcc
cccgcctgctcaccgctcccgctcttccgccattttatcggcctcggcgtccgccccaac
cgctacaccttcccgttgatgctcacctcgctctcctctctccacgaactcagcgccgta
cactcccaggtggccaagtccggcttcgcgcgcgatctccacgtccgcaacgccctcctt
gctagctacgcggcctgtgatccggacctggggcacgctgagcagttgtttgatgaaatg
ccaagcccggacgtcgttgcgtggacaacgatgatcaccgcatacaggaaccgcggccgc
agtttccatgctctgagcaccttccggcggatgtttgctgcatctgttgctcccaaccgc
gtgaccatggtttctgcacttggtgcttgtgcagcacatggtgctgtggacactggcatc
tggatccatcagtacgttcagaagcagggatgggaactggatgtcgtgttaggcactgcg
cttgttgacatgtatgggaagtgtggacatgttgtggaaggagtccgtgtattctccgaa
atgactgagaggaatgtttgtacttggaactctatcattggagcgtttgctttggagcag
aatggagaaatggctctacgttggttctacaggatgaaggctgatggtgttcgcccagat
gctgtcacactaatttgtgttctttatgcatgcacacatgctggattagttgatattggg
aggaaaatatttaacttgattgttcaaggcaagtatgggtttcaacctgggatcaagcac
tttggatgcatgattgatcttcttagtcgctctggacacctggatgacgcttttagggtt
cttgaggcaatgccatcacagccagatgctgtcatctggggcctgctattgcaaggttgc
aaggtccgtggtgatacagacttgagtgagtatgtgacaatgcgtctggtggagttagag
cctggaaacgcatcacattatgtgacccttgcaaacttgtatgctgagacagggaggtgg
ctggaggctgaggaggtcttgaaggggatgaaagaaaaaggattggcaaaggatgcaggc
tggagccttaggttagaggacagcttaagcaaatatataagtgatgaaaatttgatggaa
tgtgctctaaacatggctcctctgactcctagactggtagttcccatagatgtgaagaag
cagccatgggagcaaaaggttcctctccataaccgctggcatccagacatccctcctgtc
gctgatgtaactgaaggggaattgttccgtgttgagatggtagattggactggaggacgg
gttagagatgataactctgcagatgacatcaaattcctggatctcacaagtacccattat
cttagtggccccctaagaatagttgattctgaaggggttccagcttcaccaggtgatctt
cttgcagtagaaatctgcaaccttggcccacttcctggtgatgagtggggttatactgca
atatttgaaagagagaatggaggtggattcttaactgaccactttcctactgcgagaaag
gccatttggtatttcgaaggaatttatgcatactcccctcagataccaggtgttcgtttt
ccaggattaactcatcctggtattgtgggaaccgcaccatcagtcgaacttcttaatata
tggaatgaaagggagaaaagattggctgagacaagtccacatactcttaaactgtgtgaa
gtgttacaccagaggccccttgctaatttaccgacccctgagaactgcttacttggaaag
attcaggaagggactgctgaatggcacaaaatggcaaatgaagcagccagaactattcca
ggaagggagaatggtggtaattgtgacataaaaaatctaagcagtggttccaaagtttat
ctaccagtatttgttgaaggagcaaaccttagcactggtgatatgcacttctcccagggt
gatggtgaagtttctttttgtggagcaattgaaatgagtggattccttgagctcaagtgc
gagatcataagaggggggatgaaggaatacttgcccccagttggtccgacaccactacat
gtgaaccctatctttgagatcggtcctgttgagccacgtttctcggagtggttagtgttt
gagggcataagtgtcgatgaatctgggcggcagcatttccttgatgcatcagttgcttat
aagcgtgcagtcctgaatgccattgagtacctttccagatttgggtactccaaggagcag
gtgtatctcttactatcatgctgtccttgtgagggtaggatctctggaatagtagactct
cctaatgcagtggcaactcttgccatccctacagcaatatttgatcaggatataaggcca
aagcacttgagaggaaggctgagaccaaaattgataagacttccagatctcctgagctgc
tcaaacaatggtcttcctgtcacccaagaccaaagtagtacaagggcgccctag
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