Sorghum bicolor (sorghum): 8079402
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Entry
8079402 CDS
T01086
Name
(RefSeq) autophagy-related protein 11
KO
K08330
autophagy-related protein 11
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
8079402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8079402
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8079402
Membrane trafficking [BR:
sbi04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
8079402
Mitophagy
Scaffold proteins
8079402
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
8079402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
CompInhib_SCIN
TetR_C_1
SlyX
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
8079402
NCBI-ProteinID:
XP_002453405
UniProt:
A0A921UH60
C5XWU8
LinkDB
All DBs
Position
4:complement(5235688..5241107)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSSGSAVTGGGAEEAAAVPLGQKLMVHVAENGNTLEFQCGGDTLVEAIQHSIQLHCGIPP
NDQLLLCGNTSLDGTNGHALAYYKLPRDDREVFLYNKARLLADSRPPAPESLYIPEPNIP
PPPRPQDSPPVDASADPALKALVSYETRFRYHFQVANAVYQSSLAKFELCRRLLREGQVQ
ERALDTARSNLEHTFRKLSQRYSDFLRCFTQQHRSHVEMLANFERDVQKLRAVRLHPALQ
SEERHCLMDLLKENDLRKLADGCLSSHKKFEVKVSQLKANFLELKKRVEGLFNAMSSGGC
KDVEKLIKEHQGIIGDQKIIMQALSKDVDTSKKLVDDCSSFQLSASLRPHDAVSAVGRIY
EVHEKDNLPSIRNFDHRLTKLLEKCKDKKNEMNTLVHVCMQRVKSSQISIKGMMSELIAF
QEVMGHQEDFDNLKIVSGLGHAYRACVAEVARRKSYFKLYTGLAGTYAEKLATECQNEKT
RREDFHRTWSRYIPDNVMCSMGLFDSPSQCDVKVAPFDRDLLPIDVDDVEKLAPQSILGS
FLKSERSQLAKPLLSNSSTSGNLNKSEQNPLSADDKMDFQDFLGGYDSIDIAGTSKLEVE
NARLKAELASAIAILCNVGAEYGYESIDEGQIDAVLKKAREKTAEALAAKDEFAYQLQSL
LTAKQEKCLAYEKRIQDLEERLANQYMQGHMVSGSKGTSDSLLSAFKSNDCNLDVSGVRQ
TQIRDESSVAMDETSSTSEQPSKQTEGGDENMTDISGALNLQLLDSAACTNLDAFMTELP
RDNEHKIVNIDKEGPMLTQLTMADASDVRIEDPLSILNSRTNEHHALELRNKELLVSELQ
NTLDQKSKQLGETEIKLSAMMDEVNSLNKELEQTRGLLDESQMNCAHLENCLHEAREEAR
TNKCSADRRAVEYDALRSSALRIHGLFERLNNCVTAPGVTGFAESLRSLAISLASSVKKD
EADTTVQFQQCIKILADKVYLLTRQSADLLERYSAMQAVHGGITKELDEKKELIKNLYNK
LQLEKQASKEKISFGRFEVHELAVFFRNPAGHYEAINRNCSNYYLSEESVALFTEHHPVH
PAYIIGQIVHIERRIVHPGQMGGAPRRDSSGGRRSPASMLNPYNLPGGCEYFVVTVAMLP
DAAR
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgggtcggcggtgacaggcgggggtgcggaggaggcggcggcggtgccgctg
gggcagaagctgatggtgcacgtggcggagaacggcaacacactggagttccagtgcggc
ggcgacacgctcgtcgaggccatccagcactccatccagctccactgcggcataccgccc
aacgaccagctcctcctctgcggcaacacctccctcgacggcaccaacgggcacgcgctc
gcctactacaagcttccgcgcgacgaccgtgaggtcttcctctacaacaaggcccggctt
cttgcggactcccggcccccagcgccggagtccctctacatccctgagccaaatattcca
ccgccgccccggccgcaggactcaccacctgtggacgcatctgcagacccggcgctgaag
gcgctggtatcttatgaaacaaggttcagatatcacttccaggtcgccaatgcggtgtac
caatctagcttggcaaaatttgagctgtgcaggcggcttctgcgggaggggcaggtgcag
gagcgagcgctggacacggcacggagcaacctagagcacacattccggaagctctcgcag
cggtattcagattttttgcggtgcttcactcagcagcaccgttcacatgttgagatgctg
gctaattttgagagagatgtacagaagctgcgtgctgttaggctgcatccagcgttgcaa
agtgaggagcggcattgcttgatggaccttctcaaggagaatgacctgcggaaattggct
gacggatgcttgagctcacataagaagtttgaggttaaggtatcacagctgaaggccaac
ttcttggagctgaagaagagggtggaaggcttattcaatgccatgagctcaggtgggtgc
aaggatgttgagaagctgataaaggagcatcagggaatcattggtgaccagaagatcatc
atgcaagctctaagtaaagatgtggacacctcaaagaagcttgttgatgactgctcaagt
ttccagctatctgcttctctccgccctcatgatgcagtctcagcggttggccgtatctat
gaagtacatgaaaaggataacttgcccagtatacggaattttgatcacaggcttacaaaa
ttgcttgagaaatgcaaggacaagaaaaatgaaatgaatactttggtccatgtttgcatg
caaagagtaaaatcttctcagattagcatcaaaggcatgatgagtgaactcattgcattc
caagaggtgatgggccatcaagaagattttgataatctgaaaatagtcagtggcttgggt
catgcatatagagcttgtgtcgccgaggtagccaggaggaaatcgtattttaagctgtat
actggattggctggaacatatgctgaaaagttggcaaccgagtgtcaaaacgagaaaaca
agacgagaggatttccataggacatggagcaggtacattccagataatgtcatgtgttcc
atgggactctttgattctccaagccagtgtgatgtgaaagttgctccttttgatcgtgat
cttcttcccattgatgttgatgatgtggaaaagcttgcaccccagtctatacttgggtct
tttctgaaatctgagagatcacagctagcaaagcctttgctaagcaattctagtaccagt
ggaaatttgaacaaatctgagcaaaatcctctgagcgctgatgataagatggatttccaa
gattttctggggggctatgattctattgatattgcaggaactagtaagttagaagtggaa
aatgccaggttaaaagcagaacttgcttctgcaattgcaattctctgcaatgtcggtgct
gaatatggatatgagtctattgacgaagggcaaattgatgctgtattgaaaaaggcaagg
gaaaaaacagctgaggcacttgctgcgaaggatgagtttgcttaccagcttcagtcattg
ctcactgcaaagcaggaaaaatgcttggcatatgagaagcggatccaggatcttgaggaa
cgcttagccaaccagtacatgcaaggtcacatggtatcaggaagcaaaggcacgtctgat
tccctgctttctgcatttaaaagtaacgactgcaacctggatgtatctggagtcaggcaa
acccaaatacgtgatgaatcaagtgtggccatggatgagacctcttcaacatctgaacag
ccatctaaacaaacagaaggtggtgatgagaatatgactgacatttcaggtgcactgaac
ttgcagttgctcgattcagcagcatgtactaatctggatgctttcatgacagaattgcca
cgtgataatgaacataagatcgtaaacattgataaggaagggcccatgttgacacaactt
actatggctgatgcttctgatgttcgtatagaagatcctcttagcatcttaaactcaaga
actaatgagcatcatgccttagagttgaggaataaggagctccttgtgtcagagctgcag
aataccctagatcaaaaatcaaagcagttgggtgaaactgaaattaaacttagtgctatg
atggatgaggttaactccctgaataaagaacttgaacaaacccggggtcttcttgatgaa
tctcagatgaattgtgcacaccttgaaaactgtttacatgaagcaagagaagaggcccga
acaaacaaatgttcagctgacagaagggctgttgagtatgatgctctgcggtcgtctgct
ttgaggatacatggtttgttcgaaaggctaaataattgtgtcactgcacccggtgtgact
ggctttgcagagtcactgcgttctttggctatctccttggcaagctctgtaaagaaggat
gaagctgataccactgttcagtttcaacaatgcatcaagatcctggccgacaaagtttat
ttattgacacgacagagtgctgatctgctagaacgctattcagctatgcaggcagtacat
ggaggtatcacaaaagagttggatgagaagaaagagctgattaagaatctctacaataaa
cttcaactagaaaaacaggccagcaaggagaagatatcatttggtcgatttgaagtccat
gagcttgccgtcttcttccgaaacccggctgggcactatgaggcgatcaatcggaactgc
tcaaactactacctgtctgaggaatctgtcgccttgttcactgagcaccacccggtgcac
ccagcatacataatcgggcagatcgttcacattgagcggcgcatagtgcacccaggtcag
atgggaggagctccacgccgtgatagcagtggtggccgtcggtcgcccgcatccatgctc
aacccctacaaccttcctgggggctgtgagtacttcgtggtgactgttgccatgctgcct
gatgctgcccgttga
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integrated database retrieval system
