KEGG   Sorghum bicolor (sorghum): 8079403
Entry
8079403           CDS       T01086                                 
Name
(RefSeq) protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8079403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8079403
Spliceosome [BR:sbi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    8079403
 Complex B
    8079403
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP DUF6694
Other DBs
NCBI-GeneID: 8079403
NCBI-ProteinID: XP_002451659
UniProt: C5XWU9
LinkDB
Position
4:5247327..5256728
AA seq 945 aa
MSSKKVPYHKHREAEEARKKREEDEAARVYAEFVESFKGDSSSGAKFVRGGVIDPNAKLK
IDSEGGKSKDGGSVPKKGSRYVPSFLPPSFAKEPEKKKEEERPKEKEKGKPRVIDKFLEE
LKFEQEQRKKRNQDRDHRHEGRHSDSSMPSSRFDELPDEFDPTGRFPGSFDDGDPQTTNL
YVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRTDGQAAKD
EMQGVVVYDYELKIGWGKSVALPSQALPAPPPGHMAIRNKEGGTVVLSGPGGPAVASVTP
QTSELVLTPNVPDIVVAPPDDGRLRHVIDTMALHVLDGGCAFEQAVMERGRGNPIFDFLF
DLKSKEHTYYVWRLYSFAQGDTLQRWRTEPYIMITGSGRWVPPPLSSNRSPEREKESTFA
AGRSRRVEVERTLTESQRDEFEDMLRALTLERSQIKDAMGFALDNADAAGEIVEVLTESL
TLKETSIPTKVARLMLVSDILHNSSAPVKNASAFRTKFEASLPDVMESFNDLYRSITGRI
TAEALKERVMKVLQVWADWFLFSDAFLNGLRATFLRSGNSGVVPFHSLCGDAPEIEKKGS
SEDGNDGFKLNEDGALATGKAAATKELLGLPLAELERRCRHNGLSLCGGKEMMVARLLNL
EEAEKERVYEKDVDMKYVQGEQHTIGSGVNTSKFGESPNVDELDVSRNNMRAGKGRSGES
AFAELESFPSKKPKYDPVLPASKWSREDDISDDEDRKGGRGLGLSYSSGSDIADDLGKVD
TTEASTDHTSHHHDTIVDEEHRQKLRQIEISVMQYRESLEEQGLRNLDEIERKVASHRRR
LQSEYGLSTSADGANRRSSERTSSERKERRDDAHDYPRKRRRSQSRSRSPPRKSQERDRE
HNRSRDRSHGNDAGRDRVREKSASRGRDDHYDRSRDREKDRRKGR
NT seq 2838 nt   +upstreamnt  +downstreamnt
atgagttcgaagaaggttccgtaccacaagcatcgggaggctgaggaggcgaggaagaag
agggaggaagatgaagcggcgcgtgtatatgcggagtttgttgagtccttcaaaggtgac
agctcatctggggctaagtttgtccgaggtggtgtgatcgaccccaatgcaaagctgaag
attgactcagaaggtggaaagtccaaagatggggggtctgttccaaagaagggcagtagg
tatgttccatcgttcttgccaccatcgtttgcgaaagagcctgagaaaaagaaagaagag
gagaggccaaaggaaaaggaaaaaggaaagccacgagtaatagataaattcttggaggaa
ctcaagtttgaacaagagcaacggaaaaagcgcaatcaggatcgagatcaccgccatgaa
ggtcgtcacagcgacagctccatgccctctagccggtttgatgaactaccagatgaattt
gatccgactggaagatttccaggatcatttgatgatggtgatcctcaaaccacgaactta
tatgtcggcaatctatctcctaaggtcgatgagaattttcttttgaggacctttggtcgg
tttggacctattgctagtgtcaagattatgtggcctagaacagaagaggaacgcagaagg
caaagaaattgtggttttgttgccttcatgaatagaacagacggacaggcagcaaaggat
gaaatgcaaggtgttgttgtgtatgactatgaactgaagattggatggggtaaatctgtt
gctcttccatcacaagctttgcctgctcctcctccaggacacatggcaatcagaaataag
gagggtggtacagtcgtactttctggtcctggtggccctgctgttgcatctgttacacca
caaacctcagagctggtccttacaccaaatgttcctgatattgtggttgctccacctgat
gatggacgtcttcggcatgtgattgacacaatggctctgcacgtacttgatggtggatgt
gcttttgaacaagctgtaatggagagagggcgaggaaatcctatatttgatttcttgttt
gatcttaaatctaaagagcacacatattacgtttggaggctatactcatttgctcagggt
gatactttacaacgatggagaacagaaccatacatcatgatcacaggaagtggaagatgg
gttccacctcccttgtcatccaacagaagccctgaacgtgaaaaggaatctacatttgct
gctggtagaagcaggcgtgttgaagtggagcggacattgactgagtcacaacgtgatgaa
tttgaggacatgctgcgagctttgacattagagaggagccaaataaaagatgccatggga
tttgccttggataatgctgatgcagctggggagattgttgaggttcttacagaatccttg
acactcaaggagacgtctattccaacaaaggttgctcggcttatgctagtgtctgacatc
cttcataacagtagtgctcctgtgaagaatgcatctgcattccgaacgaaattcgaagct
tctttgccagatgttatggagagcttcaatgacttgtaccgcagtatcactggaaggata
actgctgaagctctgaaggagagggttatgaaagttctacaagtttgggcagactggttc
ctgttttctgatgcatttctgaatgggctgagggctacttttctgagatcaggcaactct
ggtgtcgttccgtttcactcgttatgcggtgatgcacctgaaattgaaaagaaaggtagc
tctgaggatggaaatgatggatttaagcttaatgaagatggtgccttggctactggaaag
gcagcagcaacaaaggagctattagggctcccactagctgaacttgagcgtcgttgtaga
cataatggcctctctctgtgtggtggtaaagaaatgatggtcgccaggctgcttaacttg
gaagaggctgagaaagaacgagtatatgagaaggatgttgacatgaaatatgtgcagggt
gaacagcatacgattggaagtggtgtgaatacttcaaaatttggtgaaagtcctaatgtt
gatgaattagatgtctctcggaacaatatgagagctggtaaaggacgttctggagaatct
gcttttgccgaacttgaatcatttccaagcaagaagccgaaatatgatcctgttttgcca
gcttctaaatggagtcgagaggatgacatcagtgacgatgaagatagaaaaggtggtcga
ggcttgggattaagctattcatctggaagcgatattgctgatgatcttggaaaggtcgat
acaacagaagctagtaccgaccacacaagtcatcatcacgatacgattgttgatgaagag
cacaggcagaagttgaggcagattgaaatttctgtcatgcaataccgtgaatctcttgag
gagcagggtctgcgtaacttggatgagattgagaggaaggttgccagccatcgaaggcgg
cttcagtcagaatacggtttatccacttcagctgatggtgctaacaggcgatcttctgaa
agaacatcatcagagcggaaagagaggcgtgacgatgcacatgattatcctaggaaacgg
cgtcggagccagagtagaagccgcagccctccaaggaagtcacaggagagggatcgagag
cacaatcgaagtagagaccgatcgcatggcaacgatgccgggagggatagggtgcgcgag
aaaagtgcaagccgagggcgagacgaccactacgacagaagccgagacagagagaaggac
aggagaaaggggaggtga

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