Sorghum bicolor (sorghum): 8079413
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Entry
8079413 CDS
T01086
Name
(RefSeq) BRCA1-associated protein
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8079413
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8079413
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8079413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
DoxA
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
8079413
NCBI-ProteinID:
XP_002453416
UniProt:
C5XWX3
A0A1Z5RM22
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All DBs
Position
4:complement(5515213..5519873)
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AA seq
519 aa
AA seq
DB search
MRTARNQGTLLQKDPSLQWCSLGDLADFLAVALPPAMATGGKPAAPQPPPAAPSSSDRAL
ESVHFSSGNPRIEETRGVVVLHPDPPAAASWSHLPVGRKPRVCVLAVPNHMTYADFCRFC
GAFVPHTLEMRIVRTDGAEDQYSVLINFDTQSSTDSFYKHFNGKQFSSLEGDVCQVRFVE
DVHYTQLIEHAHTSVTNLAEQPTCPVCLERLDQDPGGILTTICNHSFHCSCISKWTDSSC
PVCRYCQQQPEKSMCSICGTLENLWICLICGHVGCGRYKGGHAIEHWKETQHCYSLELET
QKVWDYAGDNYVHRLIQSKTDGKLVEYNCHDDHTAESTCSLCSGDAAMSEALLNSKFEAI
VEEYNDLVTFQLEKQRNYYESLLLEVKEETEREISAATEKAMSIKLQKLEAKFEKFREEK
RFLDEVNGNLVKNQEMWIETIRKAQAREQAALRLKDEKIEKLQEELRGLIAHFECQSAIA
QAQDSFSSDIPGDMILPVASESSSSGGDPVGGTRNGKQN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacggcgcgtaaccaaggaacccttttacagaaagacccctcccttcaatggtgt
tctctaggggacctagctgatttcctcgccgtcgccttgcctccggccatggcgaccggt
ggcaagcccgctgctcctcagccacctcccgccgcgccctcctcctctgaccgcgcgctg
gagtcagtccacttctcctcgggaaaccctcgcatcgaggagacccgaggcgtcgtcgtc
ctccaccccgacccgcccgccgccgcctcctggtctcatctcccggtggggaggaagccg
cgggtgtgcgtgctcgccgtgcccaatcacatgacctacgccgacttctgccgtttctgc
ggtgccttcgtcccccacacgctcgagatgcgcatcgtcagaactgatggagcagaggac
cagtacagtgttcttataaattttgacactcagagctccacagacagcttctataagcac
ttcaatgggaagcagttctcttcgctggagggggatgtttgccaagtccgttttgtggaa
gatgtgcactacactcaattgattgagcatgcacatacctcggttacaaacttggctgag
caacctacgtgcccagtatgtcttgaacgacttgaccaagatcctggaggtattctcaca
acaatctgcaaccattctttccactgttcttgcatatcaaaatggacagactcctcatgc
ccggtctgcagatattgtcagcagcaaccagagaaatccatgtgttctatttgcggaact
ttggagaatctttggatatgtctaatctgtggccatgttggctgtggaaggtacaaaggt
ggacatgctattgaacactggaaggaaacacaacattgctattcacttgagttagagaca
cagaaagtttgggactatgctggggacaactatgtccatcggcttattcagtcaaaaaca
gatggaaagctagttgagtacaattgccatgatgatcacacagcagagagcacgtgttca
ctatgcagtggtgatgccgcaatgagtgaagctctactaaacagtaaatttgaagctatt
gttgaagagtacaatgatcttgttacatttcaacttgaaaagcaaagaaattactatgag
tcacttctactagaagtcaaagaggaaactgagagagaaatttctgctgctactgagaaa
gccatgagcataaaactccaaaagttggaagcaaagtttgaaaagttcagggaagagaaa
agatttcttgatgaagttaatggcaatcttgtcaagaatcaggagatgtggattgaaacg
atacgaaaagcacaagcaagggagcaagctgcccttagattaaaagatgagaagattgag
aaacttcaagaagagctaagaggtttgatagcccatttcgagtgccaaagtgccattgca
caagctcaagattcgttctcaagtgatataccaggggacatgattcttccggtagcatca
gaatcatcctcgagcggcggtgaccctgttggtggcactagaaacgggaagcagaattga
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