Sorghum bicolor (sorghum): 8079444
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Entry
8079444 CDS
T01086
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8079444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8079444
04147 Exosome [BR:
sbi04147
]
8079444
04090 CD molecules [BR:
sbi04090
]
8079444
Enzymes [BR:
sbi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8079444
Transporters [BR:
sbi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8079444
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8079444
CD molecules [BR:
sbi04090
]
Proteins
8079444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
Zeta_toxin
AAA_16
AAA_22
RsgA_GTPase
AAA_21
AAA_15
AAA_30
APS_kinase
AAA_28
Motif
Other DBs
NCBI-GeneID:
8079444
NCBI-ProteinID:
XP_002453447
UniProt:
A0A1Z5RLC4
LinkDB
All DBs
Position
4:complement(5957355..5966465)
Genome browser
AA seq
1248 aa
AA seq
DB search
MGKDGPTQAAAAMAKKAPAPVMRWSFASVFMHADATDVVLMVLGLVGTMGDGFSTPVMLF
ITSRIFNDLGNGPDVLQEFSSKINENARNLVFLALGCLVMAFLEGYCWARTAERQASRMR
ERYLRAVLRQDVEYFDLKVGSTSEVITSVSNDSLVVQDVLSEKLPNFVMNCAMFLGSYAV
GFALLWHLTLVALPSVLLLIIPGFMYGRILIGLARRIREQYTRPGAIAEQAVSSVRTVYS
FVAERTTMAHFSAALEESARLGIKQGLAKGVAIGSNGITFAIWAFNVWYGSRLVMYHGYQ
GGTVFAVSAAIVVGGLALGSGLSNVKYFSEASSAAERVQEVILRVPKIDSESSAGDEVAN
VAGDVEFKNVEFCYPSRPETPIFVSFNLRVPAGRTVALVGGSGSGKSTVIALLERFYDPA
AGEVTLDGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEDATEEEVVAAAKAA
NAHNFISQLPQGYDTQVGERGVQMSGGQKQRIAIARAILKSPKILLLDEATSALDTESER
VVQEALDLASVGRTTIVVAHRLSTIRNADMIAVMQYGEVKELGSHDELIANENGLYTSLV
RLQQTRDSREANQVGGTGSTSAAGQSSSHSMSRRFSAASRSSSGRSMGDAENDNITEKPK
LPVPSFRRLLMLNAPEWKQALMGSFSAIVFGGIQPAYSYAMGSMISIYFLADHNEIKDKT
RTYTLIFVALAVLSFLINIGQHYNFGAMGEYLTKRVREQMLAKILTFEIGWFDRDENSSG
AICSQLAKDANVVRSLVGDRMALVIQTVSAVLTACTMGLVIAWRLALVMIAVQPLIILCF
YTRRVLLKSMSTKSIQAQSESSRLAAEAVSNLRTITAFSSQERILRLFDQAQDGPRKESI
RQSWFAGLGLGTSMSLMTCTWALDFWYGGKLVAEHHITSKALFQTFMILVSTGRVIADAG
SMTTDLAKGADAVASVFAVLDRETEIDPDNPEGYKPERLKGEVDIRGVDFAYPSRPDVII
FKGFSLSIQPGKSTALVGQSGSGKSTIIGLIERFYDPLRGVVKIDGKDIKTYNLRGLRRH
IGLVSQEPTLFAGTIRENIVYGTETATEAEIENAARSANAHDFISNLKDGYDTWCGERGV
QLSGGQKQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMVGRTSIVVAHRL
STIQNCDQITVLEKGIVVEKGTHASLMAKGTSGTYFGLVSLQQGGNQH
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggacgggccgacgcaggcggcggcggccatggccaagaaggcgccggcgccg
gtgatgcggtggtcgttcgcgtcggtgttcatgcacgcggacgccacggacgtggtgctc
atggtgctgggcctggtgggcaccatgggcgacggcttctccacgcccgtgatgctcttt
atcaccagccgcatcttcaacgacctcggcaacgggccggacgtcctccaggagttcagc
tccaagatcaacgagaacgcgcgcaacctcgtcttcttggcgctcggctgcttggtcatg
gcgttcctagaggggtactgctgggcgcgcacggcggagcggcaggcgtcgcggatgcgg
gagcggtacctgcgggcggtgctccggcaggacgtggagtacttcgacctcaaggtcggc
tccacgtcggaggtgatcaccagcgtctccaacgacagcctcgtcgtgcaggacgtgctg
agcgagaagctgcccaacttcgtgatgaactgcgccatgttcctcggcagctacgccgtc
ggcttcgcgctgctgtggcacctcacgctggtggcgctgccgtccgtgctgctgctcatc
atccccggcttcatgtacggccgcatcctcatcggcctcgcccgccggatcagggagcag
tacacccgcccgggcgccatcgccgagcaggccgtctcgtcggtgcgcaccgtctactcg
ttcgtggccgagcgcaccaccatggcgcacttctccgccgcgctcgaggagtcggcgagg
ctcggcatcaagcaggggctcgccaagggcgtcgccatcggcagcaacggcatcaccttc
gccatctgggcgttcaacgtctggtacggcagccgcctcgtcatgtaccacggctaccag
ggcggcaccgtcttcgccgtctccgccgccattgtcgtcggtggcctagctctggggtcc
gggctgtcgaacgtcaagtacttctctgaggcgagctcggcggcggagagggtccaggag
gtgatcctgcgggtgcccaagatcgactcggagagcagtgccggcgacgaggtggccaac
gtcgccggggatgtggaattcaagaacgtggagttctgctacccgtcgcggccggagacg
ccgatcttcgtgagcttcaacctgcgcgtgccggcggggcgcacggtggcgctggtgggc
ggaagcgggtccgggaagtcgacggtgatcgcgctgctggagcggttctacgacccggcg
gccggggaggtgaccctggacggcgtggacatccggcggctgcggctcaagtggctgcgc
gcgcagatggggctcgtcagccaggagccggcgctgttcgcgacgtcgatccgggagaac
atcctgttcgggaaggaggacgccacggaggaggaggtcgtcgcggcggcgaaggcggcc
aacgcccacaacttcatctcccagctgccgcagggctacgacacgcaggtgggtgagcgt
ggtgtccaaatgtctggaggacagaagcagaggattgctattgccagagctattcttaag
tcacccaagatcctcctccttgatgaagccacaagtgcattggacacagagtcagagcgt
gttgtgcaagaggcacttgacctggcttctgtgggcaggacaaccattgtcgttgcacat
cggctctccacaatccggaatgctgacatgattgctgtgatgcaatatggtgaggtcaag
gagctgggatcccatgatgagctcattgccaatgagaatggcctctacacatctcttgtc
cgccttcagcagaccagagattcaagagaggccaatcaggttggtggaactggaagtaca
tctgctgcagggcaatctagcagccacagcatgagcaggaggttctctgcagctagcagg
tcaagctcaggacggtcaatgggtgacgcagaaaatgataacattaccgagaagccaaag
cttcctgtcccttcattcagaaggttactgatgcttaatgcaccagagtggaagcaggct
ctgatgggaagtttcagtgcaattgtgtttggaggcatacagcctgcatattcatatgcc
atgggcagcatgatctcaatctacttcttggcagaccataatgagatcaaggacaaaaca
aggacctacacactcatctttgttgctcttgcagtgctctcattcttgatcaatattggt
caacattacaacttcggtgccatgggggaatacctcaccaagagagtgagagaacagatg
cttgcaaaaatccttacttttgagattggatggtttgaccgtgatgagaactccagtggt
gccatatgctcacaacttgccaaggatgccaacgtcgtgcggtctcttgtgggtgatcga
atggctctagtgatccagacagtttctgcagttctcacagcctgcactatgggtctggtg
atcgcttggcgtttggcccttgtcatgatagcagtgcaaccccttatcattctttgcttt
tatactcgccgtgtcttactgaagagcatgtccacgaaatcaatacaggcacaatctgaa
agtagcaggctagcagctgaggccgtctccaatctacgcaccatcactgctttctcatcg
caggagcgcatcctacgcctctttgaccaagcacaagatgggccacgcaaggaaagcatc
cgacagtcatggtttgcaggactgggccttggcacctccatgagcctcatgacatgcaca
tgggcccttgatttctggtatggtggcaagctcgtggctgagcatcacataacttcaaag
gcactcttccagaccttcatgatactagtaagcacagggcgtgtgattgcagatgcaggt
agcatgacaacagaccttgctaagggtgctgatgcagtagcttcagtgtttgctgttctt
gacagggaaacagaaattgaccctgacaaccctgagggatacaaaccagagaggctaaaa
ggtgaggttgacatcagaggagttgactttgcatacccatcaaggccagatgtgattata
ttcaaaggtttctccttgagcatccaaccaggcaagtcaacagcccttgttgggcaaagt
ggttctggcaagtcgactatcattgggcttatagagaggttctatgacccacttaggggg
gtagtgaagatcgatggtaaagacatcaaaacatacaatctcagaggcctgcgacgacac
attggattagtcagccaggaaccaacactatttgcgggtacaataagagaaaatattgtg
tatggtacagaaacagcaactgaagcagaaattgagaatgctgcaaggtctgcgaatgca
catgacttcattagcaacctcaaggatggatatgatacatggtgtggtgagaggggtgta
cagctttcaggaggccaaaaacaacgcattgcaattgcccgtgccatcctaaagaaccct
gctatcttgctactggatgaagctacaagtgcactggacagccagtcagagaaggtggta
caagaggcattggaccgagtgatggttggcaggacaagtattgtggtggcgcacaggctc
agcacaatccagaactgtgaccagatcactgtgcttgagaaaggaattgttgtggagaag
ggcacacatgcatcccttatggctaagggtacctctggaacatacttcggattggtcagt
ttgcaacaaggaggcaaccagcactga
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integrated database retrieval system
