Sorghum bicolor (sorghum): 8079447
Help
Entry
8079447 CDS
T01086
Name
(RefSeq) biogenesis of lysosome-related organelles complex 1 subunit 2
KO
K16750
biogenesis of lysosome-related organelles complex 1 subunit 2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
8079447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8079447
03036 Chromosome and associated proteins [BR:
sbi03036
]
8079447
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
8079447
Others
BLOC-1 complex
8079447
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
8079447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLOC1_2
HAUS5
GPS2_interact
DUF489
NDC80_loop
DUF7310
LOH1CR12
LEH
Bacillus_HBL
YGR130C_N
GCN5L1
At1g48610
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
8079447
NCBI-ProteinID:
XP_002453450
UniProt:
C5XX31
LinkDB
All DBs
Position
4:complement(6029046..6032547)
Genome browser
AA seq
127 aa
AA seq
DB search
MASANPAEAEAAGRRDELSESLAELFTNVSLMVRGELQGTNNQMALLEKMNDRVAQEYSN
YGDIAAGLRVFVEQLNEKSRGFDDYVSQIDAIDQQVTEFEAVVSMLDKHVALLEKKVKSA
YHISSTQ
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgcgaacccggcggaggcggaggcggcggggcggcgggacgagctgtcggag
tcgctggctgagctcttcaccaacgtctccctcatggtccgcggcgagctccaggggact
aacaatcagatggctctgcttgagaagatgaatgaccgcgtagcgcaggaatacagcaac
tatggtgacattgccgctggcctgcgagtctttgtagagcagctgaacgagaaaagccga
ggcttcgatgattacgtgtcgcagatcgatgcgatagaccaacaggtgactgagttcgag
gcagtggtgtccatgctcgacaagcacgttgccctcttggaaaagaaagtaaaatcggcc
tatcacatttcttctacccaatga
DBGET
integrated database retrieval system
