Sorghum bicolor (sorghum): 8079456
Help
Entry
8079456 CDS
T01086
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8079456
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8079456
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8079456
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8079456
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
8079456
Ion channels [BR:
sbi04040
]
Chloride channels
Chloride channel (CLC)
8079456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TB
Motif
Other DBs
NCBI-GeneID:
8079456
NCBI-ProteinID:
XP_002453459
UniProt:
C5XXD5
LinkDB
All DBs
Position
4:complement(6172758..6178969)
Genome browser
AA seq
793 aa
AA seq
DB search
MSSPPEDVTVGMEEEQRPLNRALLHRSATNNTSQVAMVGSNPCPIESLDYEMIENELFDQ
NWRTRSKGDQVRYVVLKWAFCFAIGILTGTVGFVINLAVENVAGFKHQAVSALMDSTSYW
TAFWVFAGGNLALLLLASSITSFVSPAAGGSGIPEVKAYLNGVDAPNIFSLRTLAVKVVG
NIAGVSSSLHVGKAGPMVHTGACIAAIFGQGGSRKYGLTCRWLRYFKNDRDRRDLVTIGA
GAGVAAAFRAPVGGVLFALESLSSWWRSALIWRSFFTTAVVAVVLRLFIELCASGRCGMF
GRGGLIMYDVSTIFDDLMTYHLKDIPTVILIGVTGALLGGLYNFLMIKVLRVYNAINERG
GAHKLLLAATVSMVTSCCVFGLPWLAPCRPCPTTGPLASPDGTCHALNRFRRFHCPAGHY
NDLASLFLNINDDAIRNLYTTGTNDVYHPASMAIFFVASYALGVLSYGVVAPSGLFVPII
LTGATYGRLVAMLLGGRSGLDHGLVAILGSASFLGGTLRMTVSVCVIILELTNNLLLLPL
VMLVLLISKTVADSFNSSIYDLILRLKGLPHLDGHAEPYMRQLTVGDVVAGPLRSFGGVE
KVGSVVHTLRTTGHHAFPVVDEPPFSPGPPVLYGLVLRAHLLVLLKKREFLAAPERCRKE
YVAGRFQAEDFDKRGSGKQDAIADVVLSPEEMEMYVDLHPFTNTSPYTVVETMSLAKALV
LFREVGLRHLLVVPKACDRSPVVGILTRHDFMPEHILGLHPVLLKSRWKRLRWQRGAVAK
YLRSLIEWVANSG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccgccggaggatgtcacggtgggcatggaggaggagcagcggcccctgaac
cgggcactgctccaccggagcgccaccaacaacacctcccaggtggccatggtcggctcc
aatccttgccctatcgagagcctcgactacgagatgatagagaacgagctgttcgaccag
aactggaggacgaggtccaagggcgaccaggtgcggtacgtggtgctcaagtgggccttc
tgcttcgccatcggcatcctcaccggcaccgtcggcttcgtcatcaacctcgccgtcgag
aacgtcgccggcttcaagcaccaggccgtctccgccctcatggactccaccagctactgg
acggcgttctgggtgttcgccggcggcaacctggcgctgctgctgctggcgtcgtcgatc
acgtcgttcgtgtcgccggcggccggcgggtcggggatcccggaggtcaaggcgtacctc
aacggcgtcgacgcgcccaacatcttctccctgcggaccctcgctgtcaaggtcgtgggg
aacatcgcgggcgtatcatcgtcgctgcacgtcggcaaggcggggccgatggtccacacc
ggcgcgtgcatcgccgccatcttcgggcagggaggctcccgcaagtacggcctcacctgc
cgctggctgcgctacttcaagaacgaccgggaccggcgcgacctggtgaccatcggcgcc
ggcgccggggtggcggcggcgttccgcgcgcccgtcggcggcgtgctgttcgctctcgag
tccctctcgtcgtggtggcgcagcgcgctcatctggcgctccttcttcacgacggccgtg
gtggcggtggtgctccgcctcttcatcgagctgtgcgcgtccgggcggtgcggcatgttc
ggccgcggcggcctcatcatgtacgacgtgagcaccattttcgacgacctcatgacctac
cacctcaaggacatccccaccgtcatcctcatcggcgtcaccggcgccctcctcggcggc
ctctacaacttcctcatgatcaaggttctccgagtctacaacgccatcaacgagagagga
ggagcgcacaagctgctgttagcggccaccgtctccatggtgacgtcgtgctgcgtgttc
ggcctgccatggctggcgccgtgccggccgtgcccgacgacggggccgctagcgtcgccg
gacgggacgtgccacgcgctgaaccgtttccggcggttccactgcccggcggggcactac
aacgacctcgccagcctgttcctcaacatcaacgacgacgccatccgcaacctctacacc
acgggcaccaacgacgtgtaccacccggcgtccatggccatcttcttcgtggcgtcgtac
gcgctcggcgtgctgagctacggcgtggtggcgccgtcgggtctcttcgtccccatcatc
ctcaccggcgccacctacggccgcctcgtcgccatgctgctcggcggccggtccggcctc
gaccacggcctcgtcgccatcctcggctccgcgtccttcctcggcgggacgctccggatg
acggtgtccgtgtgcgtcatcatcctcgagctcaccaacaacctgctcctcctcccgctc
gtcatgctcgtgctgctcatctccaagacggtcgccgactccttcaactccagcatctac
gacctcatcctgcgcctcaagggcctgccgcacctcgacggccacgccgagccgtacatg
cggcagctcaccgtcggcgacgtggtggccggcccgctgcggagcttcggcggcgtcgag
aaggtcgggagcgtcgtgcacacgctgcggaccacggggcaccacgcgttccccgtcgtc
gacgagccgccattctcgccggggccgccggtgctctacggcctggtgctgcgcgcgcac
ctgctggtgctgctcaagaagagggagttcctggcggcgcccgagcggtgccggaaggag
tacgtggccgggaggttccaggcggaggacttcgacaagcgcgggtccgggaagcaggac
gccatcgccgacgtggtgctgtcgccggaggagatggagatgtacgtcgaccttcacccc
ttcaccaacacgtcgccgtacacggtggtcgagaccatgtcgctggcaaaggcgctcgtg
ctgttccgggaggtcggtctgcgccacctcctcgtcgtgcccaaggcctgcgataggtcg
ccggtggtgggcatcttgacgaggcatgacttcatgccggagcacatcctggggctgcac
cctgtgcttctaaaaagcaggtggaagaggctccggtggcagaggggcgccgtggccaag
tacttgcgctcgctcattgagtgggtcgccaacagcggatga
DBGET
integrated database retrieval system
