KEGG   Sorghum bicolor (sorghum): 8079548
Entry
8079548           CDS       T01086                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8079548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8079548
   03041 Spliceosome [BR:sbi03041]
    8079548
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     8079548
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     8079548
Spliceosome [BR:sbi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    8079548
SSDB
Motif
Pfam: RRM_1 RRM_7 NMB0537_N SNAPC2
Other DBs
NCBI-GeneID: 8079548
NCBI-ProteinID: XP_002448611
UniProt: A0A921UE82 C5Y8W3
LinkDB
Position
6:complement(57534171..57536376)
AA seq 527 aa
MAPKKRKADPAESAAAAEAAAGNHRQEPASSEPKPRGTIYFPITDDPPESTAPDEDEDDG
AGDDEDDAEDIAKLLEPLSREQLVALLRTAAEASPATMAAVRRAAEADPASRKLFVHGLG
WGAGAEDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALSRPQLQIGGR
LAFCHLAASGPAPPASQSQNPSSNANTNANSSSNTTTNASGSSSSQPDNMQRKIFVGNVH
ADVDVDRLYEYFAQFGEIEEGPLGFDKNTGKPKGFALFVYRSAESARRALEEPMKNFDGK
TLNVQKAIDGRTKGSSGANTNANSNPTTASVAAAAAAAAQMTAPASAAISPYDASAYGAT
AVPDMSFAQQAAMLGLGAQQQAFAQPNAMLAMIAAMQNPAALGMTPAMLAAMNPAFAAAA
LGAGGQQAHTAGLTGFGAQGFGSQAFGAGGAAFPNAAGVQAAVAAYQGAGAPPGFQGPPG
FQVGQATTQTSTAAAAAASAAGYQAGAAGQGQVPGAQIGGTGFQGGY
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcgccgaagaagcgcaaggccgatcccgccgagtccgccgccgccgcggaggcagcc
gcaggcaaccaccgccaggagccggcgtcctcggagcccaagccccgcggcaccatctac
ttccccatcaccgacgacccgcccgagtccactgcccccgacgaggacgaggacgacggc
gccggcgacgatgaggacgacgccgaggacatcgccaagctgctcgagccgctgtcgcgg
gagcagctcgtcgcgctgctccgcacggcggcggaggcgagccccgccacgatggcggcc
gtgcgccgcgccgcggaggccgaccccgccagcaggaagctcttcgtccacggcctcggc
tggggcgccggcgccgaggacttgcgctccgcattctcgcgcttcggcgagctcgaggac
tgccgcgtcatctccgacaagcagtccggcagatccaagggctacgggttcgtcctcttc
cgctctcgccgctctgcgctccgcgccctcagccgcccccagctccaaatcggaggccgt
cttgctttctgccacctcgccgcctcaggccccgcgcccccagcttctcagtctcagaac
cctagctccaacgccaacaccaatgccaactctagctccaataccaccaccaacgcttct
ggttcctcgtcgtcgcaaccagataatatgcagcgcaagatatttgttggtaatgtgcat
gctgatgtggacgtggaccgcctatatgagtactttgcacaatttggtgagattgaagag
ggaccgttgggctttgacaagaacactggcaaaccaaagggatttgcattgtttgtttac
aggtctgcagagagcgctcgccgtgctttggaggagccaatgaagaattttgatggcaag
acactaaatgtgcagaaagccatagatgggaggaccaagggctcatctggagcgaataca
aatgctaactccaatcccactactgcatctgtggccgccgctgccgccgccgcagcgcag
atgactgctcctgccagtgccgccattagcccatatgatgcatcagcatatggtgctact
gcggttcctgacatgagttttgcacaacaagctgctatgctgggattaggtgcacagcaa
caggcattcgctcaacccaatgcaatgcttgccatgatagcggcaatgcagaacccagct
gcactagggatgacgccagccatgcttgctgctatgaacccagccttcgctgctgctgca
ctgggtgcaggggggcagcaggcacacacagctggtctcacgggttttggagctcagggt
tttgggtcacaggcgtttggagcaggaggtgcagctttccctaatgcagcaggtgttcaa
gcagcagttgctgcatatcaaggagctggagctcctcctggttttcaagggccacctggg
tttcaggttggacaagcaactacccagacaagcactgcagctgctgccgctgccagtgct
gctggttatcaggctggggcagctgggcagggccaggtgcctggtgctcagattggaggc
actggttttcagggtggatattga

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