Sorghum bicolor (sorghum): 8079556
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Entry
8079556 CDS
T01086
Name
(RefSeq) beta-D-xylosidase 4
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00520
Amino sugar and nucleotide sugar metabolism
sbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8079556
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
8079556
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Gene cluster
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Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
8079556
NCBI-ProteinID:
XP_002448619
UniProt:
A0A921UEQ4
C5Y8Y2
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Position
6:complement(57715445..57723241)
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AA seq
767 aa
AA seq
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MAAAFPASAALAAVAVVALLLCSCNVARAQTPVFACDASNATLASYGFCNRSASASARAA
DLVSRLTLAEKVGFLVDKQAALPRLGIPLYEWWSEALHGVSYVGPGTRFSSLVPAATSFP
QPILTAASFNATLFRAIGEVVSNEARAMHNVGLAGLTFWSPNINIFRDPRWGRGQETPGE
DPLLTSKYAVGYVTGLQDAGSGSGSLKVAACCKHYTAYDVDNWKGVERYTFNAVVSQQDL
DDTFQPPFKSCVVDGNVASVMCSYNQVNGKPTCADKDLLSGVIRGDWKLNGYISSDCDSV
DVLYNNQHYTKTPEDAAAISIKAGLDLNCGNFLAQHTVAAVQAGKLSESDVDRAITNNFI
TLMRLGFFDGDPRKLPFGNLGPSDVCTSSNQELAREAARQGIVLLKNSGALPLSASSIKS
LAVIGPNANASFTMIGNYEGTPCKYTTPLQGLGANVATVYQPGCTNVGCSGNSLQLDAAT
KAAASADVTVLVVGADQSIERESLDRTSLLLPGQQPQLVSAVANASRGPCILVIMSGGPF
DISFAKSSDKIAAILWVGYPGEAGGAAIADVLFGHHNPSGRLPVTWYPESFTKVPMIDMR
MRPDASTGYPGRTYRFYTGDTVYAFGDGLSYTSFAHHLVSAPKQVALQLAEGHTCLTEQC
PSVEAEGAHCEGLAFDVHLRVRNAGDMSGAHTVFLFSSPPAVHNAPAKHLLGFEKVSLEP
GQAGVVAFKVDVCKDLSVVDELGNRKVALGNHTLHVGDLKHTLSLGV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcgttcccggcctcggccgcgctggcggcggtcgccgtggtggcgctgctg
ctctgctcctgcaatgtggcgcgcgcgcagacgccggtgttcgcgtgcgacgcgtcgaac
gcgacgctggcgtcgtacgggttctgcaaccggtcggcgtcggcgtcggcgcgcgcggcg
gacctggtgtcgcggctgacgctggcggagaaggttgggttcctggtggacaagcaggcg
gcgctgccccggctgggcatcccgctgtacgagtggtggtccgaggcgctgcacggcgtc
tcctacgtcggcccagggacacggttctcgtcgctggtgcccgccgccaccagcttcccg
cagcccatcctcacggccgcctccttcaacgccaccctcttccgcgccatcggcgaggtg
gtgtcgaacgaggcgcgggcgatgcacaacgtggggctggcgggtctcacgttctggagc
cccaacatcaacatcttccgcgacccgcgttggggccgaggccaggagacccccggcgag
gacccgctgctcaccagcaagtacgccgtcggctacgtcacggggctgcaggacgccggc
tccggttccggcagcctcaaggtcgccgcctgctgcaagcactacaccgcctacgacgtc
gacaactggaagggcgtcgagcgctataccttcaacgccgtggtgtcgcagcaggatctg
gacgacacgttccagcccccgttcaagagctgcgtggtggacgggaacgtggccagcgtc
atgtgctcctacaaccaggtcaacgggaagcccacctgcgccgacaaggatctcctgtct
ggtgtcatcagaggcgactggaagctcaacgggtacatttcgtcagactgcgactcggtc
gatgtgctgtacaacaaccagcactacaccaaaacccccgaggacgcagctgccatctcg
atcaaagcagggctggacctgaactgcggcaacttcctggcgcagcacacggtggcggcc
gtgcaggccggcaagctgtcggagtccgacgtcgaccgggccatcaccaataacttcatc
acgctcatgcggctgggcttcttcgacggcgatccacggaagctgccgttcggcaacctt
ggcccgagcgacgtgtgcacgtcctccaaccaggagctggctcgcgaggccgcgcgccag
ggcatcgtgctcctcaagaacagcggcgcgctcccgctctccgccagctccatcaagtcc
ctggccgtcattggccccaatgccaatgccagcttcaccatgatcggcaactacgaaggc
acgccgtgcaagtacacgacgccgctgcagggcctgggcgcgaacgtggccacagtgtac
cagccggggtgcacgaatgtagggtgcagcggcaacagcctgcagctcgacgcggccacc
aaggccgcagccagcgctgacgtgaccgtgctggtcgtcggcgccgaccagtccatcgaa
cgcgagagcctggaccggacgagcctcctgctccccggccagcagccgcagctcgtgtcc
gcggtcgccaacgcgtccagaggtccgtgcatcctcgtcatcatgtcaggcggccccttt
gacatctcgttcgccaagtccagcgacaagatcgccgcgattctctgggtcggataccct
ggcgaagccggcggcgccgccatcgccgacgtcctcttcggccaccacaacccaagtgga
aggttgccggtgacatggtaccccgagtcgttcaccaaagtcccgatgatcgacatgcgc
atgcggccggacgcgtcgacgggctaccccggccggacataccggttctacaccggcgac
acagtgtacgcgttcggcgacgggctgagctacaccagcttcgcgcaccacctggtgtcg
gcgccgaagcaggtggccctgcagctcgcggagggccacacgtgcctgaccgagcaatgc
ccgtccgtggaggccgagggcgcgcactgcgagggcctggcgttcgacgtgcacctccgg
gtgcggaacgcgggcgacatgtccggcgcgcacacggtgttcctgttctcgtcgccgccg
gcggtgcacaacgcgccggcgaagcacctgctggggttcgagaaggtgtcgctggagccc
gggcaggcgggcgtggtggcgttcaaggtggacgtgtgcaaggacctcagcgtcgtggac
gagctgggcaacaggaaggtggcgctcggcaaccacacgctgcacgtcggggacctcaag
cacacgctcagcttgggagtttga
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