Sorghum bicolor (sorghum): 8079637
Help
Entry
8079637 CDS
T01086
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8079637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8079637
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
SR proteins
8079637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
RRM_3
Nup35_RRM_2
DUF2457
Motif
Other DBs
NCBI-GeneID:
8079637
NCBI-ProteinID:
XP_021312385
LinkDB
All DBs
Position
3:15799866..15805759
Genome browser
AA seq
259 aa
AA seq
DB search
MKTMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRD
ADDAIYGRDGYNFDGYRLRVELAHGGRGQSYSYDRSSSYSSARRGGVSRRSDFRVMVTGL
PSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKYAIRKLDDSQFRNAFS
RAYIRVREYDARSRSRSRSRSYSRSPSYSRSRSPKSLSRSPSPVDERSLSRSRSPVSSPS
HARSASRSTSRSRSPVRSD
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgagccgacgcaacagccgtaccatctatgtaggcaatctccctggggac
atccgtgagagggaggttgaggatctcttctacaagtatggtcgtatcttggatatcgac
ttgaaaatacctccaagacctcctggatacgctttcgttgagtttgaggatccacgtgat
gctgatgatgcaatttatggccgtgatgggtataactttgatggctacaggttgcgcgtt
gaattagctcatggtggtagaggtcagtcttattcttatgatcgttcaagcagctatagc
agtgcacgccgtggaggtgtttctaggcgctctgatttccgtgttatggtcactggttta
ccttcatctgcatcgtggcaagatctgaaggaccacatgcggcgcgccggcgatgtctgt
ttctctgatgtataccgtgaggctggagaaactattggaattgtggactatacaaattat
gacgatatgaaatacgcgattaggaagcttgatgactcacagttcaggaatgcattttca
agggcgtatatcagggtgagggagtatgatgccagatcacgaagcagaagccgtagccgg
tcgtactctagaagccccagttacagcaggagcaggagtccaaaatctctttctcggtca
ccctcacctgtggatgaaagatcgctatcaagatctcgatccccagtttcttctccttct
catgccagatctgcgagcagaagcacatcccgttctcggtctcctgtgagatccgattga
DBGET
integrated database retrieval system
