Sorghum bicolor (sorghum): 8079656
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Entry
8079656 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8079656
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8079656
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8079656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_2
DUF6274
Motif
Other DBs
NCBI-GeneID:
8079656
NCBI-ProteinID:
XP_002463559
UniProt:
C5WT38
A0A921RWH4
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All DBs
Position
1:1658625..1661649
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AA seq
191 aa
AA seq
DB search
MSSSSSASAVPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWHHGPAVHACKCPICR
RLINLLVPAALSEQEDDPQAHRILGEIQHYNCIFGGAPRSLTQRLQDLPFFIRRLFRELM
DPQRTLPLVFRARMMMMVALSAIYVLSPVDILPESMLGLLGFVDDLLILLIVFLHLAAVY
RSLLLYRHGGQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcctcctcggcgtcggccgtgccgccggaggacgacgtctgctccgtctgc
cacgaccgcttccggatcccgtgccaggcgaactgctcccattggttttgtggagagtgc
atcatccgtgtttggcatcatggccctgctgtacatgcttgcaagtgtcccatttgtcgc
cgccttataaatctgctagtgcctgctgctttatcagagcaggaggatgatccacaagct
caccgtattttaggagagattcaacactataactgtatatttggtggagcaccacgcagc
ctgactcagaggttgcaagacctacccttcttcattcgaagactgttcagagaactaatg
gatccccagcgaactctcccacttgtgttcagggcacggatgatgatgatggtcgcattg
agtgcaatttatgtgctgagccctgtcgacattcttcctgaaagtatgctggggctcctt
ggattcgttgatgacctgctcatcctgctgatcgtgttcctccaccttgccgctgtttac
cggtcattgctcctataccgccacggcggccagtag
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