Sorghum bicolor (sorghum): 8079819
Help
Entry
8079819 CDS
T01086
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8079819
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
90S particles
Other 90S particles
8079819
Pre-60S particles
Other pre-60S particles
8079819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_SPT8
WDR90_beta-prop_4th
PALB2_WD40
BBS2_Mid
SUKH_6
Motif
Other DBs
NCBI-GeneID:
8079819
NCBI-ProteinID:
XP_002459003
UniProt:
C5XGD5
LinkDB
All DBs
Position
3:complement(71586711..71591922)
Genome browser
AA seq
495 aa
AA seq
DB search
MEEDSLTGMISAISWVPRGAAKSMPVVADPPTQEEIAEAMKTFALSGGSGSDADEDDDAG
TMELDGAAEVEEVDEAARAKAVAKALGKGSSKVDDVADGLRELNMDAYDDEDEEIDVIGS
GLGDLYYPDNGMDPYLKKNNEEEEDDDDDDDSDIEDKMIMPTDFVIVCAHSEDDIFSLQV
NILEETDDGEQNIFVHHDVPLADFPLCTAWMDFNLKGGEKGNFVAVGTMDPAIEIWDLDM
VDELQPHMVLGGLSKKKKAKGKKGKKYKKGSHRSSVLGLAWNKEVRNVLASASADTTVKI
WDVAVGKCAVTLEHHDDKVQAVAWSPQSPEVLLSGSFDKTVAVNDMKDGGQSCHKWSVEA
DVESLAWNPHNEHSFVVSLENGMVQAFDKRTASSSSSGQPMYTLHAHDKAVSSISFNPSA
PNFLATGSVDKMVKLWDLSNDKPSCIASQNPKLGAIFSVSFSNDSPFLLACGGSKGKLKV
WDTLREPAVAHKFSK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggactcgctcacggggatgatctccgccatatcctgggtgcccaggggcgcc
gccaagagcatgcccgtcgtcgccgacccgcccacgcaggaggagatcgccgaggccatg
aagaccttcgccctgagcggaggctccgggagcgacgctgacgaggacgatgatgctggc
accatggaactcgacggtgcggcagaggtggaggaggtggatgaggctgcccgggccaag
gccgtagccaaggcgcttggcaagggctccagtaaggtggacgatgttgctgatgggctc
cgcgagctcaacatggatgcttacgatgatgaggacgaagagattgatgttatcggctcc
ggtttgggggacttgtactatccggacaacggaatggacccctatctcaagaagaacaat
gaggaggaggaggatgacgacgacgacgatgattcggacattgaagataagatgatcatg
cctaccgattttgttattgtctgcgcacacagtgaggatgatatcttctctcttcaggtc
aacattcttgaagaaacagatgatggtgaacaaaatatctttgtgcatcatgatgttcct
cttgctgattttccgctctgcactgcttggatggattttaatctcaaaggtggcgaaaaa
gggaattttgtagctgttggaaccatggatcctgccattgaaatatgggacttagatatg
gttgatgaattgcagccgcacatggtgctaggaggactttcaaaaaagaagaaggcaaag
ggcaaaaaggggaaaaagtataagaaaggaagtcacagaagttctgtgcttggtcttgca
tggaacaaggaagtgaggaatgttctagctagtgcaagtgctgacacaactgtgaaaatc
tgggacgtagctgttggtaaatgtgcagtcacactagaacaccatgatgacaaggttcaa
gcagttgcatggagcccacagtcacctgaagttcttcttagcggatcctttgacaaaaca
gttgccgtgaatgatatgaaagatggtggacagagttgccataaatggtctgttgaagca
gatgtggaaagtttagcttggaatccacacaatgaacactcatttgtggtcagtcttgaa
aatgggatggttcaagccttcgataagcgaacagcttcatcaagttcttctggccagcct
atgtatacccttcatgcacacgataaggctgtgtcttccatctccttcaacccgtctgcc
cccaactttcttgcaacaggctcggttgataaaatggtgaaactatgggatctatcaaac
gacaaaccatcatgcattgcctcccaaaatccaaagcttggagctattttttcggtatca
ttttcaaatgacagccccttcctattagcatgtggaggttcaaaaggcaaactaaaagtt
tgggacacgctaagggagcctgccgtagcacacaagttcagcaaatag
DBGET
integrated database retrieval system
