Sorghum bicolor (sorghum): 8079967
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Entry
8079967 CDS
T01086
Name
(RefSeq) SAM50-like protein SPAC17C9.06
KO
K07277
outer membrane protein insertion porin family
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8079967
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8079967
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
8079967
Transporters [BR:
sbi02000
]
Other transporters
Pores ion channels [TC:
1
]
8079967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
SH3-A_UBE2O
CENP-B_dimeris
Bromo_coat
Motif
Other DBs
NCBI-GeneID:
8079967
NCBI-ProteinID:
XP_002450100
UniProt:
C5Y2Z5
LinkDB
All DBs
Position
5:complement(330598..333961)
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AA seq
514 aa
AA seq
DB search
MADTDPPPSVTHDDDEDDDDEEFDDDLDDEADDGGEPPASSSEAARLEAVLRRLTADEVR
IRVHQVTIRGCDRTRRAAVEAAVGLDLARAATVRDLVRAAAAAGDRLRRLGAFDTVSITL
DAAPPGIPGSAVVVLVDVAEARGRAAGDFGVFAHTQTRSCSLEGSVKLKNLFGFCETWDA
SGALELDKTAELSAGVQMPRIGAIPTPLVARISFLSDDWLKSSLKEHLMGVSVGLLSTMN
HNLAYNLTWRKLTDPTRMSSNSVQEELGHSLLSSIKYAYKVDQRDSSIRPTRGYAFLSSS
QVGGLAPGSKYSRFLRQEFDVRVALPLGVLNGALNAGVAAGVIHPLERGSTGSVSPLLER
FYLGGNRPLVCRLGGPSSLLGFKTRGLGATESRTYDPNNSDNGTSSSPELNGLGGDIAVT
AFADLSFDLPLKPLRELGIHGHAFVCAGNLGKLTECDLRKFPVTDFLQTFRSSAGFGVVV
PTRLFRIEMNYCYILKQLDHDKGKTGIQFNFSSP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccgacccccctccctccgtcacccacgacgatgacgaggatgatgacgat
gaagaattcgatgacgacctggatgacgaagccgacgacggcggcgaacccccggcgtcc
tcatccgaggcggctcgcctcgaggccgtgctccggcggctgacggcggacgaggtccgg
atccgggtgcaccaggtcacgatccggggctgcgaccgcacgcgccgcgccgcggtcgag
gcggcggtcggcttggacctcgcgcgcgctgccactgtgcgggacctcgtgcgcgccgcc
gccgcggccggcgaccggctccgtcgcctcggcgccttcgacactgtctccatcaccctc
gacgcggcgccgcctgggatccccggtagcgccgtcgtcgtcctcgttgacgtcgcggag
gcccgaggtcgcgctgccggtgattttggcgtcttcgcccacacgcagactagatcatgc
tcacttgaaggttcagtgaagttgaagaacctatttggattctgtgagacctgggatgca
tcaggcgctcttgaattagataagacagcagaactaagtgctggagtccaaatgcctaga
atcggagcaataccaactccgctagtggctagaatatcatttctgtctgatgactggtta
aagtcctcgctcaaagaacacctgatgggcgtttctgttggcttgctctccaccatgaac
cacaaccttgcttacaatttgacatggagaaaattaactgatccaactcgcatgtcatcc
aattccgtacaggaggaattaggacatagccttttgtcctctataaagtacgcatacaag
gttgaccaaagggactcaagcataagacctacacgtggatatgcttttctgtcgtcttct
caagttggaggccttgcaccagggagcaaatattcacgatttcttaggcaggaatttgat
gttcgtgtggctttgcctctgggtgtgctgaatggcgctctcaatgccggagtggctgcg
ggagtcatccatccattggaaaggggatccacaggatctgtctcaccacttttagaaaga
ttttacttgggtggtaataggcctcttgtatgccgcttgggtggaccatcttcactatta
ggcttcaaaacaagaggactgggggcaacagaatccagaacatatgaccccaataattct
gacaatggcacttccagttctcctgagctaaatggacttggaggtgacatagcagtgaca
gcctttgccgacctgtcatttgatctgcctctgaagccgctcagggagctgggaattcat
ggccatgcctttgtctgtgctggaaatcttggtaaattaactgagtgtgatctaaggaag
ttccctgttactgacttcctacaaacattcagaagttctgcaggattcggcgtagttgtg
ccaaccagactgttccgcatagagatgaattactgctacatcctaaaacagcttgatcat
gacaaggggaagacaggcatacagtttaacttttcatcgccctaa
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