Sorghum bicolor (sorghum): 8080041
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Entry
8080041 CDS
T01086
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8080041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8080041
Spliceosome [BR:
sbi03041
]
Complex B
Other components
Prp19-related factors
8080041
Complex C
8080041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
DUF4003
L31
Motif
Other DBs
NCBI-GeneID:
8080041
NCBI-ProteinID:
XP_002436717
UniProt:
A0A1W0VRZ4
LinkDB
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Position
10:7404978..7406809
Genome browser
AA seq
506 aa
AA seq
DB search
MYGCDVATDPVTMLAAKPVPPYGRRAGLVPRRQEDFGAGGAFPEVHVAQYPLSMGLREAA
PGSNDDGVLAVTFDVRGRVAFGAVVRQGENAAKIVYSSHADLVPRIAPAHDHHDAAADED
EDEVEATTARTRAALQAIIDARRSAVQPARSRDDPTLVKYRPARQSAAFNSGAEERIVRV
EHAQEDPVLPPKHRRRRVPRPAGSPPVTVMHSPPRPVSRQDMSDWKIPPRVSDWKAAADD
RRMQDVQVSDGFASLSEALYVAEQKAREAIQTRVQVVKELKMKAKEQQSQKLREIANRAL
MEMASDAAAAPPVDAELSQQRIQRDMVREERRRHREYEKRREASASASSGKKSRITRDRD
RDVGERIALGMASTGGGAGAGGELAYDERLFNQDAGMDSGFAADDQYNVYSGRLFAVQPA
ALSMLCRPSKHGDSAVCGGADEHIEKIARTGRFKPDKVFSGAPERPAVGERDRPVEFDMP
EECGEADDPFVELDQYMAKVKEGKKH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtacggctgcgacgtcgcgacagatcccgtgaccatgctggcggcgaaacccgtgccg
ccctacggccggcgcgccggcctcgtgcccaggcggcaggaggacttcggcgccggcggg
gccttccccgaggtgcacgtcgcgcagtacccgctctccatgggcctccgcgaggcggcg
ccgggatccaacgacgacggcgtgctggccgtgaccttcgacgtgcgcggccgcgtcgcg
ttcggcgcggtcgttcggcagggcgagaacgccgccaagatcgtctactccagccacgcc
gacctcgtccccaggatcgctcctgcgcacgatcatcatgacgccgccgccgacgaggac
gaggacgaggtggaggctaccaccgcccggacgcgggccgcgctgcaggcgatcatcgac
gctcgccgctccgccgtacagccggcgcgtagccgggacgatccaacgcttgtcaagtac
aggccggcgcggcagtcggcggcgttcaactcgggcgcggaggagcggatcgtgagggtg
gagcacgcgcaggaggacccggtcctgccgcccaagcacaggcgcaggcgggtgccgcgc
ccggccgggtcgccgcccgtcaccgtgatgcactcgccgccgcgtcccgtgtcgcggcag
gacatgtcggactggaagatcccgccgagagtttcggactggaaggcggcggcagacgac
cggcggatgcaggacgtgcaggtcagcgacggcttcgccagcctctcggaggcgctgtac
gtcgcggagcagaaggccagggaggccatccagacgcgcgtccaagtggtcaaggagctc
aagatgaaggccaaggagcagcagagccaaaaactgcgtgagatcgcgaacagggcgctc
atggagatggcgtccgacgctgctgcggcgccgccagtggatgcggagttgagccagcag
aggatacagcgcgacatggtacgcgaggagcggcggcgccatagggagtacgagaagcgg
cgggaggcgtcggcgtcggcgtcgagcggcaagaagagcaggatcacgagagatagggac
cgggacgtcggtgagaggattgccctgggcatggctagcaccggaggcggcgccggcgct
ggtggcgagctcgcctacgacgagcggctgttcaaccaggacgcggggatggactccggg
ttcgccgcggatgaccagtacaacgtctactcggggaggctcttcgccgtgcagccggcg
gcgctgtcgatgctctgcaggcccagcaagcacggcgactctgctgtatgcggcggcgcg
gatgagcacatcgagaagatagctaggacgggcaggttcaaacctgacaaggtgttctct
ggcgctccggagcggcctgccgtcggcgagagggacaggccagttgagttcgatatgcct
gaggagtgtggagaagccgatgatcccttcgtcgaacttgatcaatacatggctaaggtg
aaggaggggaagaaacattga
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