KEGG   Sorghum bicolor (sorghum): 8080041
Entry
8080041           CDS       T01086                                 
Name
(RefSeq) SNW/SKI-interacting protein
  KO
K06063  SNW domain-containing protein 1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8080041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8080041
Spliceosome [BR:sbi03041]
 Complex B
  Other components
   Prp19-related factors
    8080041
 Complex C
    8080041
SSDB
Motif
Pfam: SKIP_SNW DUF4003 L31
Other DBs
NCBI-GeneID: 8080041
NCBI-ProteinID: XP_002436717
UniProt: A0A1W0VRZ4
LinkDB
Position
10:7404978..7406809
AA seq 506 aa
MYGCDVATDPVTMLAAKPVPPYGRRAGLVPRRQEDFGAGGAFPEVHVAQYPLSMGLREAA
PGSNDDGVLAVTFDVRGRVAFGAVVRQGENAAKIVYSSHADLVPRIAPAHDHHDAAADED
EDEVEATTARTRAALQAIIDARRSAVQPARSRDDPTLVKYRPARQSAAFNSGAEERIVRV
EHAQEDPVLPPKHRRRRVPRPAGSPPVTVMHSPPRPVSRQDMSDWKIPPRVSDWKAAADD
RRMQDVQVSDGFASLSEALYVAEQKAREAIQTRVQVVKELKMKAKEQQSQKLREIANRAL
MEMASDAAAAPPVDAELSQQRIQRDMVREERRRHREYEKRREASASASSGKKSRITRDRD
RDVGERIALGMASTGGGAGAGGELAYDERLFNQDAGMDSGFAADDQYNVYSGRLFAVQPA
ALSMLCRPSKHGDSAVCGGADEHIEKIARTGRFKPDKVFSGAPERPAVGERDRPVEFDMP
EECGEADDPFVELDQYMAKVKEGKKH
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgtacggctgcgacgtcgcgacagatcccgtgaccatgctggcggcgaaacccgtgccg
ccctacggccggcgcgccggcctcgtgcccaggcggcaggaggacttcggcgccggcggg
gccttccccgaggtgcacgtcgcgcagtacccgctctccatgggcctccgcgaggcggcg
ccgggatccaacgacgacggcgtgctggccgtgaccttcgacgtgcgcggccgcgtcgcg
ttcggcgcggtcgttcggcagggcgagaacgccgccaagatcgtctactccagccacgcc
gacctcgtccccaggatcgctcctgcgcacgatcatcatgacgccgccgccgacgaggac
gaggacgaggtggaggctaccaccgcccggacgcgggccgcgctgcaggcgatcatcgac
gctcgccgctccgccgtacagccggcgcgtagccgggacgatccaacgcttgtcaagtac
aggccggcgcggcagtcggcggcgttcaactcgggcgcggaggagcggatcgtgagggtg
gagcacgcgcaggaggacccggtcctgccgcccaagcacaggcgcaggcgggtgccgcgc
ccggccgggtcgccgcccgtcaccgtgatgcactcgccgccgcgtcccgtgtcgcggcag
gacatgtcggactggaagatcccgccgagagtttcggactggaaggcggcggcagacgac
cggcggatgcaggacgtgcaggtcagcgacggcttcgccagcctctcggaggcgctgtac
gtcgcggagcagaaggccagggaggccatccagacgcgcgtccaagtggtcaaggagctc
aagatgaaggccaaggagcagcagagccaaaaactgcgtgagatcgcgaacagggcgctc
atggagatggcgtccgacgctgctgcggcgccgccagtggatgcggagttgagccagcag
aggatacagcgcgacatggtacgcgaggagcggcggcgccatagggagtacgagaagcgg
cgggaggcgtcggcgtcggcgtcgagcggcaagaagagcaggatcacgagagatagggac
cgggacgtcggtgagaggattgccctgggcatggctagcaccggaggcggcgccggcgct
ggtggcgagctcgcctacgacgagcggctgttcaaccaggacgcggggatggactccggg
ttcgccgcggatgaccagtacaacgtctactcggggaggctcttcgccgtgcagccggcg
gcgctgtcgatgctctgcaggcccagcaagcacggcgactctgctgtatgcggcggcgcg
gatgagcacatcgagaagatagctaggacgggcaggttcaaacctgacaaggtgttctct
ggcgctccggagcggcctgccgtcggcgagagggacaggccagttgagttcgatatgcct
gaggagtgtggagaagccgatgatcccttcgtcgaacttgatcaatacatggctaaggtg
aaggaggggaagaaacattga

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