Sorghum bicolor (sorghum): 8080071
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Entry
8080071 CDS
T01086
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.4
KO
K14487
auxin responsive GH3 gene family
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8080071
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
HATPase_c_2
Motif
Other DBs
NCBI-GeneID:
8080071
NCBI-ProteinID:
XP_002441339
UniProt:
C5Z0F7
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Position
9:complement(54004072..54006676)
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AA seq
647 aa
AA seq
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MPEAPVTTMREAATAAAAAAVPETHRELLEYIERVTAGAAQVQRRVLAEILAQNAPAEYL
RRLGVAGDAPGAVDAFRRAAPLVTYEDILPDVLRIANGDTSPILSGKPIREFLTSSGTSG
GERKLMPAIADEMDRRSLLYSLLMPVMSQAVPGLDKGKCMYLYFVKAESRTPGGHPARPV
LTSFYRSRHFLERPHDPYTVYTSPDEAILCVDAYQSMYAQLLCGLVHRADVLRVGAVFAS
GFLRAIRFLEKHWQRLCRDIRTGTLDAEAVTDRAVRAAVEQRVLLRADPALADAVEAECA
RTSWQGIIRRVWPNTKYIDVIVTGAMAQYIPQLEFYGGGLPLTCTMYASSESYFGINLNP
MCKPSEVAYTLIPTMCYFEFLPLPQPGDDDAGEPDQRDLVDLVDVKLGHEYELVVTTYSG
LYRYRVGDVLRVAGFKNQAPMFNFLRRKNVVLSIDADKTDEAELHAAVSGAVQHLAPFGA
SLVEYTSYADAGTIPGHYVLFWELRLRAAAAAGATPTPVPASVFEDCCLAVEEALNSVYR
QGRAADRSIGPLEIRVVSDGTFDKLMDYALARGASINQYKAPRCVRPGPVVELLDGRVQA
SYFSPKCPKWSPGVGKQWSSDAAAAAKKAAAGGSNGGGGGGGAVVVA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggcgccggtcaccacgatgcgagaggcggcgacggcggcggcggcggcggcg
gtgcccgagacgcaccgcgagctgctcgagtacatcgagcgcgtgacggcgggggcggcg
caggtgcagcgccgcgtgctggcggagatcctggcgcagaacgcgcccgccgagtacctc
cggaggctgggcgtggcgggcgacgcgccgggcgccgtcgacgcgttccgccgcgccgcg
ccgctcgtcacctacgaggacatcctccccgacgtgctgcgcatcgccaacggcgacacg
tcgcccatcctctccggcaagcccatccgcgagttcctcaccagttccggcacgtcggga
ggggagcgcaagctgatgccggcgatagccgacgagatggaccggcggtcgctgctgtac
agcctactgatgccggtgatgagccaggccgtgccggggctggacaagggcaagtgcatg
tacctctacttcgtcaaggcggagtcgcgcacgccggggggccacccggcgcgcccggtg
ctgacgagcttctaccggagccgccacttcctggagcggccgcacgacccttacaccgtg
tacaccagccccgacgaggccatcctctgcgtggacgcgtaccagagcatgtacgcgcag
ctgctgtgcggcctcgtgcaccgcgccgacgtgctccgcgtgggcgccgtcttcgcctcg
ggttttctccgcgccatccgcttcctggagaagcactggcagcgcctgtgccgggacatc
cgcaccggcacgctggacgccgaggcggtcacggaccgcgccgtgcgcgccgccgtggag
cagcgggtgctcctccgcgccgacccggcgctcgccgacgccgtcgaggccgagtgcgcc
aggacgtcgtggcaggggatcatccggagggtgtggcccaacaccaagtacatcgacgtc
atcgtcaccggcgccatggcgcagtacatcccgcagctcgagttctacggcggcgggctg
ccgctgacctgcaccatgtacgcctcctccgagagctacttcggcatcaacctgaacccc
atgtgcaagcccagcgaggtcgcctacaccctcatccccacaatgtgctacttcgagttc
ctccccttgccacagcccggcgacgacgacgccggcgagcccgaccagcgcgaccttgtc
gacctcgtcgacgtcaagctcgggcacgagtacgagctcgtcgtcaccacctactcaggg
ctgtatcggtatcgcgtgggcgacgtgctgcgcgtggccgggttcaagaaccaggcgccc
atgttcaacttcctgcgccgcaagaacgtggtgctgagcatcgacgcggacaagaccgac
gaggcggagctgcacgcggcggtgagcggcgcggtgcagcacctggccccgttcggcgcg
tcgctggtggagtacacgagctacgcggacgctgggaccatcccgggccactacgtgctc
ttctgggagctccgcctccgcgctgcggcggctgcgggcgcgacgccgacgccggtgccg
gcgtcggtgttcgaggactgctgcctggccgtggaggaggcgctgaacagcgtgtaccgg
cagggccgcgccgccgaccgctccattggcccgctggagatcagggtggtgtcggacggc
acgttcgacaagctcatggactacgcgctcgcccgcggcgcgtccatcaaccagtacaag
gcgccccggtgcgtgcgcccgggccccgtcgtggagctgctggacgggcgggtgcaggcc
agctacttcagccccaagtgccccaagtggagccccggagtaggcaagcagtggagcagc
gacgccgccgccgccgccaagaaggcggccgccggcggcagcaatggtggaggtggagga
ggaggggcggtcgtcgtcgcctga
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