Sorghum bicolor (sorghum): 8080200
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Entry
8080200 CDS
T01086
Name
(RefSeq) pumilio homolog 24
KO
K14844
pumilio homology domain family member 6
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8080200
03009 Ribosome biogenesis [BR:
sbi03009
]
8080200
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
8080200
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
8080200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
TPR_LAA1_C
Motif
Other DBs
NCBI-GeneID:
8080200
NCBI-ProteinID:
XP_002463569
UniProt:
C5WTZ2
A0A921RW79
LinkDB
All DBs
Position
1:1903170..1909073
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AA seq
652 aa
AA seq
DB search
MAGGGDRQGAKKRKREHAEGKAKPRPQVKGGGDGGKRKKHSAADGGAGEAVARKKTPVTH
KEKRIAAKEMSEARKMKRKRHYSLEKELTKLWEKMRCHDVSKEERSKVVSEAIKKMDGKY
LDIATSHITARVLQTCVKWCSQSERDAIFDVLHPHLLDLSRKKYAVFLVKKLIELASKKQ
FASFISSLHGRVAKLLHHTIGAAVVDYAFQRGTKRQKKQLLLELYSTELQLFQDLTLQSS
CCLIDTISKLGLQLSSVLQYMTIVIHKILEKGTVEYSIVHTAILEYFTIADKTSASDVIC
QLIPLLTQGALIIDGDEPSNAPELPKKTKAKKKRSKEPLIVRIMQTREGLKLGIGCLKHG
SAKDRKKIIKSLKGHILKLALSDFGCLFLICILSIVDDTKLVSKIVIQELAKHLKQLIFD
KNGRRPLLQLLNPLCSRYLSPDDLACLNYNVPSLSPKEGDTSENVVNGMTDEDPNGLVVM
QIVSESKKDPLQRRHELLVKTELAEALIQSCLENVGELLRTNFGKEILYEIVVGGKDNIL
EGLTDRIHMLHDAIVSDAAQPKTEDIEHAFENFFSSRVIRRMIIDCPAFAVTLWRKVLEG
KCKIWAEGYSSKVVAGFLESPSKEVKDLAKPELQPLVDAGILKVPDPKVVQK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggcggcgatcgccagggcgcgaagaagcgcaagcgcgagcatgcggaaggg
aaggccaagcctcggccgcaagttaagggaggtggggacggagggaagcggaagaagcac
tcggccgcagatggcggggccggagaggctgtggcgaggaagaagactccggttacccac
aaggagaagcgcatcgcggccaaggaaatgtcggaggccaggaagatgaagaggaaacgg
cattacagccttgagaaggaactaacgaaactgtgggaaaagatgagatgtcacgatgtg
agcaaagaagagaggtccaaggtagtaagtgaggctatcaagaaaatggatgggaaatat
ttggatattgccacatcacatattactgcacgtgttcttcaaacatgtgtaaagtggtgc
tcgcagtcagagagggatgctatttttgatgttctacatccacatttgctcgatctttct
cgcaagaaatatgctgttttccttgtaaagaagcttatagaactcgcctctaaaaaacag
tttgccagtttcatctcttctcttcatggtcgtgttgccaaacttcttcatcatactata
ggagctgcagttgttgattatgcatttcagcggggaacaaaacgtcagaaaaaacagttg
ttgctggaactgtactccactgaacttcagctattccaggatctgactttgcaaagttcc
tgctgtttgatagatacaatttccaagcttgggttgcagttatcatctgtcctgcagtac
atgactattgtgattcataaaatcttggagaaaggtactgttgagtattcaatagtgcac
acggccatattggagtactttacaattgcagataagacctcagcctcggacgttatttgt
caacttatcccccttcttactcaaggagcattaatcatagatggagatgaaccatcaaat
gctccggagctaccaaagaaaacaaaagctaagaagaaaaggtcgaaagagccacttatc
gttaggatcatgcagacaagggaaggtttaaaactaggaattggttgcctcaagcatggc
agtgcaaaggacaggaagaagatcattaaaagtttgaaggggcacattctgaagcttgct
ctaagtgattttggatgccttttccttatctgcattctttccattgttgatgacacaaag
cttgtttctaagattgtcattcaagagctggcaaaacatttaaagcaactcatttttgac
aagaatgggagacggccattgctgcaactactaaaccctctttgctcacgctatctttct
ccggatgatctggcttgtctgaactacaatgtgccgtctcttagtccaaaagagggtgac
acatcagaaaacgtagtaaatggtatgactgatgaagaccctaatggcttagtagtcatg
caaattgtgtctgagagcaagaaggatccattacaaaggcgacatgaactgttggtgaaa
actgagctggctgaggctctcatccaatcatgccttgaaaatgttggagaattacttcga
acaaattttggcaaagaaatattatatgagattgttgttggtggtaaagacaatattttg
gagggcctcactgataggatccacatgttgcatgatgcaatagtgtctgatgcagcccaa
ccgaagactgaagatattgaacatgcatttgagaatttcttttccagtcgtgtaatcaga
agaatgataattgactgtccagcatttgcagtcactctctggagaaaggttcttgaagga
aagtgcaagatatgggctgaaggatacagctcgaaggtggttgcaggtttcctggaatcg
ccaagtaaggaggtcaaggatcttgcaaaacctgagctgcagccactggttgatgctggc
atccttaaagtgccagaccctaaggttgttcagaaataa
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