Sorghum bicolor (sorghum): 8080291
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Entry
8080291 CDS
T01086
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03020
RNA polymerase
sbi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8080291
09124 Replication and repair
03420 Nucleotide excision repair
8080291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8080291
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8080291
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
8080291
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
8080291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SIR2_2
Motif
Other DBs
NCBI-GeneID:
8080291
NCBI-ProteinID:
XP_002447457
UniProt:
C5YC44
A0A921QNH2
LinkDB
All DBs
Position
6:complement(1945384..1948971)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRFEMARL
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagatcgctatgagcgctttgtcgtgcctgagggcaccaagaaggtgtca
tatgagagggacacaaagatcgtgaatgcagcatctttcactatcgagcgcgaggaccac
accatcggcaacattgtccgcatgcagctgcacagagacccaaatgtgctctttgctggc
tataagctccctcatccacttcagtacaagatcatcgtcaggatccatactaccagccag
tcctccccaacacaggcctactcccaggcagtcaatgatctagacaaggagcttgagtac
ctcaagcaagcttttgaggacgagaagaacaggtttgagatggcgagactttag
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