Sorghum bicolor (sorghum): 8080320
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Entry
8080320 CDS
T01086
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8080320
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
8080320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_EML_2
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
8080320
NCBI-ProteinID:
XP_021318823
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All DBs
Position
6:complement(45596042..45601157)
Genome browser
AA seq
1335 aa
AA seq
DB search
MKNLRLVTRLPQQLQLQIDGETLVASAIDAERRRAFFASSTNFIYTVSLPSSFTQEQQPL
QWSKIATQHSDMEEVVLDPGDCIVAMDYLMERESLLLGSSAGCLLLYNVDEKTSEVVGRL
EGGVNTIASSPDGALLSVTTGLGQLLVITQDWEVLFETSLDPQDATIDNIDSTGGQIRSA
ISWRGDGKYFATLVAPDSPSSPTKLNVWERESGKVHSSSDAKTFMGASLDWMPSGAKVAT
ALDRRTEGKCPLIVFYEKNGLERSHFSIDEPAEVVIQALKWNCNSEILAALVSSSQHDVI
KIWTCRNNHWYLKHELRYTKEEGVKFFWDPTKPMHLICWTMSGQVTIHKFAWTTAVSESS
VALVIDGSHVLVTPLILGLMPPPMSLFHLAFPCAVNEVSFVTNSSKSHLAAYLSNGSLSI
VELPAPDTWEEFEGNGISVDLCCSDFTLNNCMHLTWIDTRTLIGICCYSENYSLTTIGSS
ETRNLVGKHDSMFFINEIELICSEDSVPGSVSSSGWQARVSKKVQLESSVIGVSPNPAKR
GSAFIQISGGRIIEYCSSLILSKMCPPAQFIDIGSDHCFPASCPWMTAVLCYENGMAEPF
LFGLDESGKLYMGKRLLSNNCSSFTFYSSAYGATEPVMSHLLVTTKQDLLFIVDVNEILL
KDIEVTIDGLVSTPARGKQSKEHITVWEKGAKLVGVLHGDEAAVIMQTTRGNLECTYPRK
LVLVSIVQALVQRRFKDAIDMVRRHRIDFNIIVDYCGWNAFMNSAADFVKQVNNLTHITE
FVCSMKNSNVSSKLYEAYISFPDQCAVPMADSESSPGLLVGNKVTSVLMAVRKALEEQIE
ESSSRELCILTTLARSEPPLLEQALNRIKLIRESELLGLDDAKRKLYPSAEESLKHLLWL
TDTEAVFGAALGLYDLNLAAIVALNSQKDPKEFLPFLKSLESLPPAIMRYTIDLRLGRYE
SALRNIVSAGNEYHEDCMKLLNGNPQLFPLGLQLFNEPDKRNQILEAWGDHLSEEKCFED
AALTYQCCSSYQKSLRAYRACGDWRGVFTVAGLLELKKEEIVQLAHELCDEFQALGKPGD
AARVALEYCSDAERGVSYYIMAREWEEALRVAYMLSRHDLVETVRDAASECATSLISEYQ
EGLLKIGKYVARYLAVRQRRLSLAAKLQSEDRFMDVEDDNVSEVSTSFSEMSAYTTRSTR
ESSASVISSNVSKSRGARRAKKGGKIRAGSPGEEMALVEHLKGMALTGGAQNELKSLLVV
LIQLGKEERARQVQEAAGNFEVSHTAAVKLAEDTVCSDKVDESTHTLEHYVKMLKAHGSG
DSEPGSWRIKALSPP
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacctgcgccttgtgacgaggctcccgcagcagctccagctccagatagacggc
gagaccctcgtcgcctccgcgatcgacgcggagcgccgccgcgccttcttcgcctcctcc
accaacttcatctacaccgtctcactcccttcgtccttcacccaggaacagcaaccactg
caatggagcaaaattgctactcaacactctgacatggaggaggttgttcttgatcctgga
gattgtattgttgccatggattatctcatggagagggagtctctgctccttggttcgtca
gctggttgcctgctcttgtataacgtggacgagaaaacatctgaagttgtcggaagactg
gaaggtggtgtcaacaccattgcctctagccccgatggggcccttctctctgtcaccact
ggactcggccagctgcttgttatcacacaggattgggaagtgctttttgagacttctctt
gaccctcaagatgctaccattgacaacatagacagtaccggtggtcagatccgaagtgca
atttcttggcgaggggatggaaagtatttcgctacacttgtagcccccgatagcccttct
agccccacaaaacttaatgtctgggaacgtgaatcgggaaaggtgcattcttcttcagat
gccaaaacttttatgggagcatcgctagattggatgcctagtggagccaaggttgctaca
gcccttgataggaggacagagggaaagtgccctctcattgttttctatgagaagaatggc
ttagagaggagccacttttctattgatgagccagcagaggttgtcattcaagctttaaag
tggaactgcaattctgagatccttgctgctctggtttcttctagtcagcatgatgttatt
aaaatatggacctgcaggaacaatcactggtacttgaaacatgaattgcggtacacaaag
gaagagggggtaaagttcttttgggatccaacgaaaccaatgcatctgatttgctggaca
atgagtggccaggtcacaattcacaagtttgcttggactacagcggtcagtgagagttca
gttgcacttgtgatcgatggttcccatgttcttgttactcctcttatcctgggcctgatg
ccacctcccatgtctctgttccaccttgcatttccttgtgcagtgaatgaggtttctttt
gtgaccaatagctcaaagagccacttggctgcttatctgtcaaatggcagcttgtctatt
gtggaacttccagcaccagatacatgggaagaatttgaaggcaatgggataagtgttgac
ctttgctgttctgactttactttgaataactgtatgcacctcacttggatagatacacgc
accttgattggtatctgttgctatagtgaaaactactctttaacaacaatcgggtccagt
gaaaccagaaaccttgtaggtaaacatgattcgatgtttttcatcaatgagattgaactt
atatgttcagaggattctgtgccaggttcagtgagttcatctggatggcaggctagagta
tcaaagaaagtgcaattggagagttcagtcattggagtctctccaaacccagcaaaaaga
ggctcagccttcattcaaattagtggaggaaggattattgagtactgctcaagtttaatt
ctgtcaaaaatgtgtccaccagcacaattcattgacattggttctgaccattgttttcca
gcatcatgtccttggatgactgcagttctgtgctatgaaaatggtatggcagaacccttt
ctctttggactcgatgaaagtggcaagctttatatgggcaaaaggttattgagcaacaac
tgcagcagcttcacattctactccagtgcttatggagctactgagccagttatgagccac
ttgcttgtgactactaagcaagatcttctattcattgtggatgtcaatgagatcttactt
aaagacattgaggtgacaattgacggccttgtcagtactcctgctcgaggaaagcaaagc
aaagagcacatcactgtgtgggaaaagggagcgaagttggttggtgttctccatggtgat
gaagcagctgtcataatgcaaacaacacgtggtaacttagagtgtacctaccccaggaag
ctagtccttgtttcaattgttcaagcactggttcagaggcgtttcaaagatgcaatagac
atggtgaggcggcatcggatagatttcaatatcattgttgactattgtggttggaatgct
tttatgaattcagcagcagactttgttaaacaagttaataaccttacccacatcactgaa
tttgtttgctcaatgaagaacagcaatgtcagcagcaaattgtacgaagcctatatatca
tttcctgatcagtgtgcagtcccaatggcggatagtgaaagttcacctggtttattggtg
ggtaacaaagtcacttctgtacttatggcagttcgaaaagcccttgaggaacaaatagaa
gagagctcatcaagagagctttgtatattgaccactttggcccgtagtgaacctccattg
ttggagcaggcactgaatagaataaaactcattcgagaatcggaacttcttgggcttgat
gatgccaagcgaaagctctacccttctgctgaagagtcactgaagcacttgctttggtta
acagatactgaagctgttttcggtgctgctttggggttgtatgatctgaatcttgctgct
atcgttgctttgaattcccaaaaagatccaaaagagttccttcctttccttaagagtctt
gaaagcctcccccctgctatcatgaggtacacaattgatctaaggcttggaagatatgag
agtgctctcagaaacattgtttctgctggcaatgagtaccatgaggattgcatgaaactc
cttaatggtaatcctcagctgttcccactgggcctccagttatttaacgaaccagataaa
aggaatcaaattcttgaggcatggggtgaccatctttctgaagagaaatgctttgaggat
gccgcattgacttatcagtgctgttcgtcatatcagaaatcactgagagcttaccgtgct
tgtggggactggagaggtgtttttaccgttgcaggccttttggagttaaaaaaggaagaa
attgttcaacttgcacacgagttatgtgatgagttccaggcgcttggcaagccaggagat
gctgctagagtagcactggagtattgttcagatgccgaaagaggtgtaagttattatatc
atggcaagggaatgggaagaggctcttagagttgcctatatgcttagcaggcatgatctg
gttgaaactgtcagagatgcagcttcagaatgtgccacatcactgatatctgagtaccag
gaaggactgttgaagattggtaaatatgtagcacgttatttggctgtccgacagagaaga
ttgtcacttgctgccaaactccagtcagaagatcggtttatggatgttgaagatgacaac
gtttcagaagtgagcactagcttcagtgaaatgagtgcatataccacaaggtcaaccagg
gagtcaagtgcttcggtcatatccagcaatgtcagcaaatcacgaggggcaaggcgggca
aaaaaaggtggcaaaatacgagctggaagtccaggggaggaaatggcccttgtggagcat
ctcaaggggatggcgctcacaggtggtgcccaaaatgagctgaagagcctgcttgtggtt
ctaatacagctgggaaaagaagagcgagcccgtcaggtgcaggaggctgcaggtaatttt
gaagtgtctcatactgctgcggtgaagttggccgaggacacagtatgcagcgacaaggta
gacgagagcacacacacccttgagcattacgtaaagatgctgaaggctcatgggtcgggt
gacagtgagccgggttcatggcgaatcaaagcattgtctcccccgtga
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integrated database retrieval system
