Sorghum bicolor (sorghum): 8080373
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Entry
8080373 CDS
T01086
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8080373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8080373
03036 Chromosome and associated proteins [BR:
sbi03036
]
8080373
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
8080373
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
8080373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_SCAP
WDR54
Beta-prop_DCAF4
CFAP43_N
YajC
Motif
Other DBs
NCBI-GeneID:
8080373
NCBI-ProteinID:
XP_002453658
UniProt:
A0A921R3W5
C5XZL9
LinkDB
All DBs
Position
4:complement(12820069..12823097)
Genome browser
AA seq
475 aa
AA seq
DB search
MDAGTYSISSEKSHKAAKAAAAPRPPLQEAGSQPYMPSLSTGSRNPSAKCYGDRFIPDRS
AMDMDVAQYLLTEPRKDKENAAAAASPSKEMYRRLLAEKLLNNRTRILAFRNKPPEPENV
SATIAASAHHAKPAKQRRHIPQSAERTLDAPELVDDYYLNLLDWGSNNVLSIALGDTVYL
WDASTGSTSELVTIDEDSGPITSVSWAPDGKHIAVGLNSSDVQLWDTSSNRLLRTLRGVH
EARVGSLAWNNSILTTGGMDGKIVNNDVRIRNHVVQTYEGHSQEVCGLKWSGSGQQLASG
GNDNLLHIWDVSMASSMPSAGRNQWLHRLEDHTAAVKALAWCPFQSNLLATGGGGSDRCI
KFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGH
TSRVLFMAQSPDGCTVASAAADETLRFWNVFGAPEAPKPVKASHTGMFNSFNHIR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggcacctactccatctcatcagagaagagccacaaggcggcgaaggcagcg
gcggcgccacggccgcctctccaggaggccggctctcagccctacatgccgtcgctgagc
acggggtcgcgcaacccgtcggccaagtgctacggcgataggttcatcccagacaggtcg
gcgatggatatggacgtggcgcagtacctgctcacggagcccaggaaggacaaggagaac
gcggcagcggcggcatccccatccaaggagatgtaccggaggctgctcgccgagaagctg
ctcaacaaccggacgcggatcctcgccttcaggaacaagccgcctgagcctgaaaacgtc
tcagcaaccatcgcggcttccgcccaccacgccaagccggccaagcagcggcgacacatt
ccccagtctgctgagaggactctggacgcaccagagctcgttgatgactactacctcaac
ctccttgactgggggagcaacaacgtgctgtccattgctctgggcgacacggtgtacctg
tgggatgcctccactggatccacgtctgagcttgtgaccatcgacgaggacagcggtccc
atcaccagcgttagctgggctccagacggcaagcatatcgctgttgggctcaactcgtct
gatgtccagctctgggacaccagctccaaccgactgttgagaactctcagaggtgtgcat
gaggcaagagttggctcactggcatggaacaacagcatcctcaccactggcggcatggat
ggcaagatcgtgaacaacgacgtgaggattaggaaccatgtcgtgcagacgtacgagggg
cacagtcaggaggtgtgtgggctcaagtggtctggatcagggcagcagctggccagcggg
ggtaatgacaaccttctgcacatttgggacgtgtcgatggcatcctccatgccatccgct
ggccgcaaccagtggctgcacaggcttgaggaccacacagctgctgttaaggcactcgca
tggtgtccgttccagagcaacttgctggcaaccggtggtggtggtagtgatagatgcatc
aagttttggaacacgcacaccggtgcatgtctgaactctgttgacaccggatcacaggtc
tgtgcccttctctggaacaagaatgagagagagctgctgagttcacacggatttacacag
aaccagctaacattgtggaagtacccatcaatggtaaagatggctgaactcactggccat
acttctcgtgtccttttcatggctcagagccctgatggttgcacagtagcatcagccgct
gcagatgagacccttcggttctggaacgtgtttggagcccctgaagcgcccaagccggtc
aaggcttcccacactgggatgttcaacagcttcaaccatatccgatag
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