Sorghum bicolor (sorghum): 8080492
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Entry
8080492 CDS
T01086
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00900
Terpenoid backbone biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8080492
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbi01006
]
8080492
Enzymes [BR:
sbi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8080492
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8080492
Prenyltransferases [BR:
sbi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8080492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8080492
NCBI-ProteinID:
XP_021319712
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All DBs
Position
6:complement(58752351..58756257)
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AA seq
405 aa
AA seq
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MSSLLHAVSSSSGGAPAALEAEVEEKLVLYDDDDNAPPPAAPPQIKRGERRLQPRREGSA
ADVVGDHRERFLRAYDRLRDELLDDDSCELTDEATRWVAQMIDYNVPGGKLNRGLSVIDS
YLLLKQGSEVAEDEFFLACVLGWCVEWFQACALLLDDIMDDSHTRRDQICWYRRPEVGLH
GINDGILLKCHIARLIKKYFREKPYYIDICELWNEIALQTSLGQMLDLISTHNVANDVAK
YNIEGYRRIVKYKTSYYSFYLPVACALLLCGTKLENISGLRDVLIEMGIYFQAQDDYLDC
FADPNTIGKIGTDIEDHKCSWLIVQALSHANSNEIEVLLKNYGKKDSTSVSKVKNTYSTL
DLKDIFSEFEDRAYKHLVTSIEDQHDHAVQEILKSFLKKIHRRKK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgctgctgcacgctgtgtcctcgtcatccggtggagctcctgccgccctcgaa
gccgaggtcgaggagaagctcgtcctgtacgacgacgacgacaacgcgccgccaccggca
gcaccgccacagatcaagcgaggggagcggcgcctgcagcctcgtcgtgagggcagcgcc
gccgacgtcgtcggtgaccaccgcgagaggttcctccgcgcatacgatcgcctccgggac
gagctcctcgacgacgactcgtgcgagctcaccgatgaggccacgcgctgggtcgcgcag
atgatcgactacaacgtgcctggagggaaactgaatcgaggtctgtcagtgatcgatagt
tacttgctgttgaaacaaggaagcgaggttgctgaagatgaattcttccttgcctgtgtt
cttggttggtgtgtcgagtggtttcaagcatgtgcactgctacttgacgatatcatggat
gattctcatacaaggagagatcagatttgttggtaccgacggcctgaggttggtcttcac
ggcataaacgacggtattctactaaaatgtcacatcgcacgtttgataaaaaaatacttt
agagaaaagccttactacatagacatctgtgaattatggaacgagatagctttgcagact
tctctcggacagatgcttgatcttatcagcacacataatgtggcgaatgacgtcgcaaaa
tacaatattgaagggtaccgtcgtattgtcaagtacaagacatcttactactctttttat
cttcccgtagcttgcgcattgctgttgtgtggcacaaaacttgaaaacatcagtgggcta
agggatgtgcttattgaaatgggcatatattttcaggcacaggatgattacttggattgc
tttgcagatcctaatacaatagggaagattggaactgatattgaagatcacaagtgttcc
tggctaattgtgcaagctcttagccatgccaacagtaacgagatagaagtattgctgaaa
aactacggaaagaaggattcaacttcagtttccaaagtgaaaaacacttattcaactctt
gatttgaaggacatcttctctgagttcgaagatcgagcttacaaacacttggtcacttct
attgaagatcaacatgaccacgcggtgcaggagatcctcaaatccttcctaaagaaaatc
caccgccggaagaagtag
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