Sorghum bicolor (sorghum): 8080502
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Entry
8080502 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8080502
KO
K03504
DNA polymerase delta subunit 3
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03030
DNA replication
sbi03410
Base excision repair
sbi03420
Nucleotide excision repair
sbi03430
Mismatch repair
sbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8080502
03410 Base excision repair
8080502
03420 Nucleotide excision repair
8080502
03430 Mismatch repair
8080502
03440 Homologous recombination
8080502
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8080502
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbi03032
]
8080502
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8080502
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8080502
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
8080502
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
8080502
MMR (mismatch excision repair)
DNA polymerase delta complex
8080502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
8080502
NCBI-ProteinID:
XP_002454978
UniProt:
C5XL75
A0A921R9K6
LinkDB
All DBs
Position
3:2155847..2162948
Genome browser
AA seq
516 aa
AA seq
DB search
MAGGAVDQSLLDLLPQIHALFSDPLRVISYKWLSRNFSISSNDAKRLLQEFVNKHGTNLQ
VIYSVSGWLKNNPQNYCIKLISGTKLEEGRQGFKDSCSVQIYSIQACIPKDTAVLWNPEF
VQAEELFNQPFDDENCLRDNRFCGVLNSSVKRTSNGKHVSSLPPKPLNSAAVVAQSKPSV
TPKEQFVTAQQQDLPVSSKQGAGNKSEKDNSTVLDKAGSAPVVKEQSIDAHASKSKAQNG
KAMPSNGGSLANMWGRASAKPKPPSTTNSTAVASVAATADAQICAKEEADGDSSDDEQGV
KYKRGSTNANNKKRRAVFDFSDDEEDDNIISIASPELPKQHTPDPVIGTAEDAEVNQKNL
ENNDDVPNNEKGSSMGMDSDFTAECKIKTVNTMNHSGITLKEKSSDPPINDKKQDSAAEP
ASTSPKRRKVLKTRIDERGREVTEVVWEGEASADDKAEKNVNTTAATASGATLPSKPKPA
ANTDKSKAPSKAAAGNKKPAKAGTKQGSIMSFFKKV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggggccgtggaccagtcgctgctcgacctgctgccccagatccatgccctc
ttctccgacccgcttcgcgtgatttcgtacaaatggcttagtcggaacttctctatatca
tcgaatgatgccaagaggttgcttcaggagtttgtcaacaaacatggaaccaacctccaa
gtgatttacagtgtgtcggggtggttgaagaacaatccccaaaattactgtataaagctc
atttcagggacaaaacttgaagaaggaaggcaaggtttcaaagattcttgttcggtccag
atctacagtatccaggcctgtattccaaaagatacagctgtactttggaatcctgaattt
gtgcaggcagaggagcttttcaaccagccttttgatgacgagaactgtttgagagataat
aggttttgtggtgttttgaattcttctgtcaagcgaacatccaatgggaagcatgtgagt
tcattgccaccaaagcccttaaatagtgctgcagtagtcgcacagtctaaacctagtgtt
actccaaaggagcagtttgttactgctcagcagcaagatttgcctgtaagttcaaagcag
ggagcaggcaataagtctgagaaggataattctacagtattagataaagctggcagtgca
cctgttgtcaaagaacaatcaattgatgcccatgcaagcaaaagtaaagctcaaaatgga
aaggccatgcctagtaatggtggatcactggctaacatgtggggccgtgcatcagcaaaa
cctaagcctccaagtaccactaattctacagctgtagcaagtgttgcagctacggctgat
gcacaaatatgtgcaaaagaagaagcagatggagatagcagcgatgatgaacagggagta
aagtacaagaggggatccaccaatgcaaataacaaaaagagaagagcggtatttgatttt
tcagacgatgaggaagacgacaatattataagcattgcatctcctgagctaccaaaacag
cataccccagaccctgttattggaactgctgaagatgctgaagtaaatcaaaagaacttg
gaaaataatgacgatgtaccaaacaatgagaaaggttcctcaatggggatggattctgac
ttcactgctgaatgtaaaatcaaaactgtcaatactatgaaccattctgggattacttta
aaagaaaagagcagtgatcctccaatcaatgacaagaagcaggattctgcagctgagcct
gcctccacctcaccgaagagaagaaaggttttgaagacacgcatagatgagaggggaagg
gaagttaccgaggttgtctgggagggtgaagcttctgcagatgacaaggcagagaagaat
gtcaacactactgctgcaactgcaagcggggcgactctcccaagcaaaccaaagccagca
gcaaacactgacaaaagcaaagctccaagcaaagcagcagcaggcaacaagaaacctgcg
aaggctggaaccaagcaagggagcattatgtcattcttcaagaaagtatga
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