Sorghum bicolor (sorghum): 8080518
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Entry
8080518 CDS
T01086
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8080518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8080518
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8080518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
8080518
NCBI-ProteinID:
XP_002457170
UniProt:
C5XLT1
LinkDB
All DBs
Position
3:complement(2485259..2488736)
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AA seq
373 aa
AA seq
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MWALKVWGPHVGDTDVLFASSHSHARGFQKPKAHSTVELALSARVSSLAAVMSASRPDHR
RHHPPFLRDLSSPISSSFRLPPASMRRETQASTPPPPPPLLSLDDLSHQSPSPHPATPPQ
ATATPSPQPSRGAGLFSSPMRSNGSPAPSAWWTPSREEKPREGSPMDGVVQHQQQSPTTP
SGQQSQQQKVALITLPPPREVARPEMPRDSAPAAGRVDEEEWVTVFGFPPGDTNMVLREF
EKCGIVLRHVPGPRDANWVHILYQSRHDAQKALAKHGQQLNIVLIIGVKPVDPWQRQYLN
ENTNENYQGSATITFTSQPVAPSGFATRNALAPLPSNSVPNGSCNESNRGASGAIASPTK
SVLSKVMDLMFGL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccctgaaggtctggggtccacatgttggtgacacagacgttctgtttgcctct
tcgcattcacacgcgcgaggcttccaaaaacccaaggcgcactcgactgtggaactcgct
ctgtctgctagggtttcatctctcgccgccgtcatgagtgcctccaggccggaccaccgg
cgccaccacccgccgttcctgcgggacctgtcgtccccgatctcctcgtcgtttcgcctc
ccaccggcctcgatgcggcgagagacgcaggcctccaccccgccgccgccgccgccgctg
ctctccctcgacgacctctcccaccaatccccctccccgcacccggccacgcctccgcag
gcgactgcgacaccctcgcctcagccctcgcgtggtgccggcctcttctcctcgccaatg
cggtccaacggctcgccggccccctcggcgtggtggaccccctcgagggaggagaagccc
agggaggggtcaccgatggatggcgtcgtgcagcaccagcagcagtccccgacgacgccg
tcgggtcagcagtcacagcagcagaaggtagcgctgatcacgctgccgcctcccagggag
gttgcgcggccggagatgccgagagattcggctccggctgctggccgggtcgacgaggag
gaatgggtcaccgttttcggatttccgcctggtgatactaacatggtgctgcgagaattt
gagaagtgtgggatagtcttgagacatgttcctggtccaagggatgcaaactgggtgcat
atcttgtatcagagccgtcatgatgcacagaaagcacttgccaaacatgggcagcagtta
aacattgttcttattattggtgtgaagccagtggatccatggcagcggcaatacctgaat
gagaacaccaacgagaactatcagggcagtgctacaatcacatttacatcgcaacctgta
gcaccaagtggatttgcaaccaggaacgcactagcacctttacctagcaactctgtgcca
aatggcagctgcaacgagagcaaccgtggcgcatctggggccattgcttcgcctacaaaa
tctgtcttgtccaaagttatggacttgatgtttggcctttaa
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