Sorghum bicolor (sorghum): 8080541
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Entry
8080541 CDS
T01086
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8080541
Spliceosome [BR:
sbi03041
]
Common components
Common spliceosomal components
General mRNP proteins
8080541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
8080541
NCBI-ProteinID:
XP_002465838
UniProt:
C5WXU5
A0A921S7C8
LinkDB
All DBs
Position
1:76965702..76972713
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AA seq
541 aa
AA seq
DB search
MDFDEYEYLEKTVEASGAPANGSSGPGSGDKDKERSSRRRSSGGDEERDDVKRRSKRSRS
EEGRDRDRERHRDRDRHRSSRERRDRDRDGKEKERDREKDKDMRSRDRDLERERERERER
EKEKDRQRRSRSRSERHRDDEGRDRYRERDVRRRKEEVAEPEVDPERDQRTVFAFQLSLK
ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQV
MVKPSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNINEDQLRQVFEPFGQVELVQLPL
DPLTGLCKGFGFVQFVRLEDAKAAQSLNGQLEIAGRVIKVSAVTDQAGVQVSGATGDLDD
DEGGGLALNASSRALLMQKLDRSGITTSLTGGMGTAGLSTPVVIPTVSVLGAAPAAAPLL
HPTVPGLGSIPGATLPITTPSIDLAPPSECLLLKNMFDPALETDPDFDLDIRDDVQEECS
KFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFP
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtatctggagaagacggtggaagcgtccggagcgccggcc
aacggttcgtcgggccccgggtcgggggacaaggacaaggagcgcagctcacgccgccgc
tcatcgggcggtgacgaagagcgtgacgacgtaaagcgcagatcgaagcgttctcgctcc
gaggaaggccgcgaccgcgatagggagcggcacagggatcgcgaccggcaccgcagcagt
cgggagcggcgggaccgtgaccgtgacggcaaggagaaagagcgggacagggagaaggac
aaggacatgaggagccgcgaccgtgacctcgaacgggagagggagagggagagggagagg
gagaaggagaaggataggcagcggaggagccggagccggtcggagcggcaccgcgatgac
gaagggcgtgatcgctaccgtgaacgcgatgtcagacgtaggaaagaggaggttgctgaa
cctgaagttgatccagaaagagatcagaggactgtgtttgctttccagttatctttgaag
gcagatgaaagggacgtatatgagttcttttctagagctggaaaggtccgggatgttcgt
ctcattatggatcgaaattcacgacgttctaaaggtgtcgggtatattgaattctatgat
gctatgtctgttccaatggcgatagctctttctggtcagttgcttcttggtcaacaagtg
atggttaagccttcagaggctgaaaagaatttagttcagtcaaatgcttcttcaagtgga
gctgcttcaggtggagcaaggaagttgtatgttggaaatcttcactcgaacattaatgag
gaccagttgcgacaggtctttgaaccatttggacaagtggagcttgtccagttgccattg
gatcctctcactgggctatgcaaaggttttggttttgtgcagtttgtacgtcttgaagat
gcaaaagcagctcagagtttgaatgggcaacttgagattgctggaagagtcatcaaggtt
tcagctgtgacagaccaagcaggcgtgcaagttagtggagctacaggagatttagatgat
gatgaaggtggaggcttggcactgaatgccagttccagagctcttctaatgcagaagttg
gaccgcagtggcattacaaccagtttgactggtggaatgggtactgctggtttgagtact
ccagtggtaataccaactgtatctgtccttggtgctgctccagctgcagctcctcttctg
caccctacagtgcctggtcttggttcaattcctggggcaactcttccaattactaccccg
tctattgatttggctccacctagtgaatgcctattgctcaagaatatgtttgatccagct
ttggagacggatcctgattttgatttggacattagagatgatgttcaggaggaatgttcc
aagtttggtcaattgaaacatatttttgtagacaaaaatactgctggttttgtgtacctg
cggtttgatagtataacagcagctatgagcgcacagaaagcacttcatggaagatggttc
gcagggaagatgataacagcaacttttatgacccctcaacagtatgaaatgaagtttccg
agctag
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