Entry |
|
Name |
(RefSeq) RNA-binding protein 39
|
KO |
K13091 | RNA-binding protein 23/39 |
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Organism |
sbi Sorghum bicolor (sorghum)
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Brite |
KEGG Orthology (KO) [BR:sbi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:sbi03041]
8080541
Spliceosome [BR:sbi03041]
Common components
Common spliceosomal components
General mRNP proteins
8080541
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
1:76965702..76972713
|
AA seq |
541 aa
MDFDEYEYLEKTVEASGAPANGSSGPGSGDKDKERSSRRRSSGGDEERDDVKRRSKRSRS
EEGRDRDRERHRDRDRHRSSRERRDRDRDGKEKERDREKDKDMRSRDRDLERERERERER
EKEKDRQRRSRSRSERHRDDEGRDRYRERDVRRRKEEVAEPEVDPERDQRTVFAFQLSLK
ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQQV
MVKPSEAEKNLVQSNASSSGAASGGARKLYVGNLHSNINEDQLRQVFEPFGQVELVQLPL
DPLTGLCKGFGFVQFVRLEDAKAAQSLNGQLEIAGRVIKVSAVTDQAGVQVSGATGDLDD
DEGGGLALNASSRALLMQKLDRSGITTSLTGGMGTAGLSTPVVIPTVSVLGAAPAAAPLL
HPTVPGLGSIPGATLPITTPSIDLAPPSECLLLKNMFDPALETDPDFDLDIRDDVQEECS
KFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTPQQYEMKFP
S |
NT seq |
1626 nt +upstreamnt +downstreamnt
atggacttcgacgagtacgagtatctggagaagacggtggaagcgtccggagcgccggcc
aacggttcgtcgggccccgggtcgggggacaaggacaaggagcgcagctcacgccgccgc
tcatcgggcggtgacgaagagcgtgacgacgtaaagcgcagatcgaagcgttctcgctcc
gaggaaggccgcgaccgcgatagggagcggcacagggatcgcgaccggcaccgcagcagt
cgggagcggcgggaccgtgaccgtgacggcaaggagaaagagcgggacagggagaaggac
aaggacatgaggagccgcgaccgtgacctcgaacgggagagggagagggagagggagagg
gagaaggagaaggataggcagcggaggagccggagccggtcggagcggcaccgcgatgac
gaagggcgtgatcgctaccgtgaacgcgatgtcagacgtaggaaagaggaggttgctgaa
cctgaagttgatccagaaagagatcagaggactgtgtttgctttccagttatctttgaag
gcagatgaaagggacgtatatgagttcttttctagagctggaaaggtccgggatgttcgt
ctcattatggatcgaaattcacgacgttctaaaggtgtcgggtatattgaattctatgat
gctatgtctgttccaatggcgatagctctttctggtcagttgcttcttggtcaacaagtg
atggttaagccttcagaggctgaaaagaatttagttcagtcaaatgcttcttcaagtgga
gctgcttcaggtggagcaaggaagttgtatgttggaaatcttcactcgaacattaatgag
gaccagttgcgacaggtctttgaaccatttggacaagtggagcttgtccagttgccattg
gatcctctcactgggctatgcaaaggttttggttttgtgcagtttgtacgtcttgaagat
gcaaaagcagctcagagtttgaatgggcaacttgagattgctggaagagtcatcaaggtt
tcagctgtgacagaccaagcaggcgtgcaagttagtggagctacaggagatttagatgat
gatgaaggtggaggcttggcactgaatgccagttccagagctcttctaatgcagaagttg
gaccgcagtggcattacaaccagtttgactggtggaatgggtactgctggtttgagtact
ccagtggtaataccaactgtatctgtccttggtgctgctccagctgcagctcctcttctg
caccctacagtgcctggtcttggttcaattcctggggcaactcttccaattactaccccg
tctattgatttggctccacctagtgaatgcctattgctcaagaatatgtttgatccagct
ttggagacggatcctgattttgatttggacattagagatgatgttcaggaggaatgttcc
aagtttggtcaattgaaacatatttttgtagacaaaaatactgctggttttgtgtacctg
cggtttgatagtataacagcagctatgagcgcacagaaagcacttcatggaagatggttc
gcagggaagatgataacagcaacttttatgacccctcaacagtatgaaatgaagtttccg
agctag |