KEGG   Sorghum bicolor (sorghum): 8080599
Entry
8080599           CDS       T01086                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8080599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8080599
Spliceosome [BR:sbi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    8080599
 Complex B
    8080599
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 8080599
NCBI-ProteinID: XP_002465895
UniProt: C5WYY2
LinkDB
Position
1:77897533..77906178
AA seq 969 aa
MSRKIHGENDSERITSEGTAARTRPLSIKDIMLRREKKAASESKKAKEGLENGKGKSTHL
EQGREHKSRKDARDMPVEGSRKEKSRDATREGSKKEKPRHIPRENPKKEDTRYAPKEVSK
KDNSRDRPNTGAKMDDLKDAPKVPEKEGLGDAPKKASKKQRPSGDDNHSVRKDKDIHHSQ
KLVTNMSGRADESKDRNLSEIRERKGDVMRSEYQKEPGKRWNDEAVGDDKIKFKSEKLRN
ETKRKDRSFDNERSPEVDRPMSKKQDSAWFQDSKHSDRYAGRNEYAKPYHGEPGFKRRRS
RSRDHDRERYGRSISPPLREERYNYRGRDFGNYPPHYSMEKSRRKYAEVDKQKLSGSGGY
IGGSHQKYESRLGGYSPRKKKTSLQAEQATTKTPSKVIQSPEKKSATWDQPPVKANQSNF
PTTFLPTVGQMAPIPFSFSTIKKDPSTTVETMLVGNSLTADSVQLTQATRPLRRLHIENL
PDSATEDKLIDCLNDFLLPTGIKPQRSKPCLSCTINREKRQAFVEFLTPEDATAALSFDG
RSLNGSTLRIRRPKEYVETVNVTPKKPAEETALISDVVADSPHKIFIAGIAGVISSEMLM
EIVSAFGPLAAYRFLFNSELGGPCAFLEYADRSITSKACAGLNGMMLGGCVLTAVHVFPN
PPVEAANEASPFYGIPENAKSLLKEPTKVLQLKNTFEREEYMLLSKSELEETLEDVRVEC
TRFGAVKSVHVVEYPAGGGSAAEDNTVELKIECTEFADTENIAKAVSEYSVPINQSIDVL
NHSEASETKDVDPIPESQDHKDKHLPSNAALCECKAPVADEDAELDETQSRAALPTSQHA
EVGHTEAAVDENKHTGAGEVTATVMDDDAVEKSHQDPRTSETCSPAEPTDKVEKPGSADD
VTENRPEKVPAVETSDTGFVFEPGSVLVEFMRKEAACIAAHSLHGRRFGNRTVHAGYAPY
DLYLQKYPR
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgagtagaaaaatacatggtgaaaatgactctgagagaatcactagtgaagggacagct
gcccgcacaagacctctaagcattaaggacattatgctacggcgtgaaaagaaggctgca
tcagaatctaagaaagccaaggaagggctagaaaatggtaagggcaaatctactcacttg
gaacaaggaagagaacataaaagcagaaaggatgccagagatatgcctgtggagggttca
agaaaggagaagagtagagatgcaacaagagagggctccaagaaagaaaaaccaagacat
ataccaagggaaaatccaaaaaaggaggacacgagatatgcaccaaaggaggtatccaag
aaggacaactctagagataggccaaacactggtgcgaagatggatgacttgaaagatgca
ccaaaggtcccggagaaggaaggcctgggagatgcaccaaagaaggcttccaagaaacag
aggccctcaggagacgataatcattcagttaggaaagacaaagacattcatcattctcag
aaacttgtcacaaacatgagtggtcgggctgatgaaagcaaagatagaaatcttagtgag
atcagagaaagaaagggtgatgtaatgagatctgagtatcaaaaggaacctggaaaaaga
tggaatgatgaagctgttggtgatgataaaataaagtttaagagcgagaagcttcgaaat
gagacaaagagaaaagaccgtagctttgataatgagaggagtccagaggtagatcgacca
atgtcgaagaaacaggattctgcatggttccaagattccaagcattctgatagatatgct
ggaaggaatgagtatgcaaaaccataccatggagaacccgggtttaaaaggagaaggtcc
agaagcagggatcatgatcgagaaagatacggcaggtctatctcaccaccactaagggaa
gaaaggtataactaccgtgggcgtgattttggcaattatcctccacactactctatggag
aaatcaaggaggaagtatgctgaagttgataaacaaaaattgtctgggagtggaggatac
attggtgggtcgcaccagaaatatgaaagccgtcttggtggatactcaccgaggaaaaag
aaaacatcactgcaagctgagcaggcaactaccaagactccttccaaggtcattcagtcc
ccagaaaagaaatcagccacatgggaccagcctcctgttaaagcaaaccaatctaacttc
cctaccactttcctgccaactgttggccagatggctcctattccattcagtttcagcacg
ataaagaaggacccttcaactacagttgagacaatgttggtgggtaatagtttgactgca
gattctgtccagcttacacaagcaacacgcccgctcaggaggttgcacattgaaaatttg
cccgattcagctacggaggataagttgattgactgcttgaatgacttcttattgcctact
ggcattaaaccccagcggtctaaaccatgcctcagttgtacgataaacagagaaaaacgt
caggcattcgtggaatttcttacaccagaggatgctacagcagctctttcttttgatgga
aggtctctaaacggatctactttgagaattcgacgccccaaagaatatgttgaaacggtg
aatgtaacccctaagaagcctgctgaagagactgctttaatatctgacgttgttgcagat
tcaccacacaagattttcatagcggggattgctggagtgatctcatctgagatgctaatg
gagattgttagtgcatttggcccattggctgcgtaccgctttctttttaacagtgagctc
ggtggaccctgtgcatttcttgagtatgccgatcgctccattacttctaaggcatgtgct
ggcctcaatgggatgatgcttggtggatgtgtactcactgctgtgcatgtgtttcctaat
cctcctgtggaggctgctaatgaggcgtccccattttatggtattcctgaaaacgccaaa
tctcttctgaaagaaccaacaaaggtcctgcagctaaaaaatacgtttgaacgagaagag
tatatgctactttcaaaatctgagctggaagaaactttggaagatgtacgtgttgaatgt
acgaggtttggagcagtcaaatctgtacatgtagttgagtatcctgctggtggtggtagt
gctgcagaggataacacagttgagctcaagattgaatgcactgaatttgctgatactgaa
aacattgcaaaggctgtatcagaatattctgtaccgatcaatcagagcatagatgttcta
aatcattctgaagcttcggaaactaaagatgtagatcctattccagagagccaagatcat
aaggacaaacacttgccatcaaatgcagcactttgtgagtgtaaagcgcctgtagctgat
gaggatgcagagcttgatgaaactcagtctagagctgctctccccacatcacaacatgct
gaagttggtcatactgaagcagctgtggatgagaataaacatacgggagcaggggaggtt
actgctactgtaatggacgatgatgcagtagaaaagagtcatcaagacccaagaacctca
gagacctgtagtcctgctgaacctacagacaaagtggagaaacctggaagtgctgatgat
gtgactgaaaatcgtccagaaaaagtcccagctgttgagaccagtgatactggtttcgtg
tttgaacctggttctgtgcttgtggagttcatgcggaaggaagctgcatgcatagctgca
cattccttgcatggacggcgcttcgggaacagaactgtgcatgctggatatgctccatac
gatctctacttgcagaaatacccaaggtga

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