Sorghum bicolor (sorghum): 8080688
Help
Entry
8080688 CDS
T01086
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8080688
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
8080688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
AAA_23
TK
AAA_22
AAA_27
Motif
Other DBs
NCBI-GeneID:
8080688
NCBI-ProteinID:
XP_021310422
LinkDB
All DBs
Position
2:67990113..68003538
Genome browser
AA seq
803 aa
AA seq
DB search
MEGDAAGADGGGGGGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETGCSYHNT
RTLLHFYDPMVVIVPPNKTAADGMVGVSELIDKHYPANKKVTMARGCFDDTKGAGIVKSL
SARDPSALGLDTYCKQYYLCLAAVTATIKWIESEKGVFITNHSLSVTFNGSFDHMSIDST
SVQTLEIIDPLHTELWGTSNKKKSLFQMLKTTKTTGGARLLRANLLQPLKDIQTINARLG
CLDELMSNEELFFGLTQGLRKFPKESDKVLCHFCFKPKKVRDEVLKPANGRKSQKLISDI
IVLKTALDAIPFLSKVLKGAKSVLLHNIYQTVCENPKYANMRKRIGDVIDEDVVHSRAPF
VACTQECFAVKAGIDGLLDVARRSFCDTSEAVHNLAKQYREEYNMPNLKMPYNTRQGFYF
MIPQKDITDRLPNKFIQVVRHGKNIHCSSLELASLNVRNKTAAAECFSRTELCLEGLIDE
IRGDIGILTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDDGPMAINAGRHPILET
LRTDFVPNDIFLSEASNMVLIMGPNMSGKSTYLQQICLIVILAQIGCYVPAQFASLRVVD
RIFTRIGNGDNVENNSSTFMTEMKETAFIMQNVTSRSLVVVDELGRATSSSDGLAIAWSC
CEYLLSVKAYTVFATHMERLSELATMYPNVKILHFEVDLRNDRLDFKFRLKDGVRRVPHY
GLLLARVAGIPTSVIDTSTSITSQITEQEMTRMDANCEEYRSLQMTYQVVQRLICLKYSN
HDEDYIREALQNLKESYAAGRLT
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacgccgccggagctgacggaggaggaggaggcggcggagagcggtctagc
ttcgtgatcggcctcatcgagaaccgcgccaaggaggttggtgttgcagcctttgattta
agatcagcctcattgcacctatctcagtatattgagacaggttgctcataccacaataca
aggacactacttcatttctatgatcccatggttgtcattgtgcccccgaacaaaacagca
gcagatggtatggttggagtttcagaactgatcgataagcattacccagcaaacaaaaag
gtcactatggcacgtggttgctttgatgacacaaagggtgctggcattgtgaaaagtctt
tcagctagagacccatctgcgcttggtttagatacttactgcaagcagtattatctttgt
cttgcggctgtcactgcaacaattaaatggatagaatcagaaaagggcgtgttcattacc
aatcactcattatcagttacattcaatgggtcatttgaccatatgagtatcgactcaact
agtgttcaaacattggaaattattgatcctctccataccgaactatggggcactagcaac
aaaaagaaaagcctctttcagatgctgaagactacaaagactacaggaggggctagattg
ctgagagccaatttattacaaccattaaaagatattcagaccatcaatgctcgtctaggc
tgcttggatgagctaatgagcaatgaggagctgttttttggtttgactcaaggtctacgg
aaatttccaaaagaatcagataaggttctctgtcatttctgcttcaagcccaaaaaggtt
agagatgaggtattgaagcctgccaatggtagaaagagccagaagttgatttctgatatt
attgttcttaaaactgctctggacgccataccattcttgtccaaggttttgaagggggca
aaaagtgttcttcttcacaacatttatcagactgtatgtgaaaaccccaagtatgcgaat
atgagaaagagaattggagatgtcattgacgaggatgtggttcattcaagggctccattt
gtagcctgcactcaggaatgttttgctgttaaggcaggaattgatgggctgcttgatgtt
gctcgtcgatctttctgtgataccagtgaagccgtacataacctcgccaaacagtacagg
gaagaatataatatgccaaatttgaagatgccctataatactaggcaaggattttacttt
atgataccccaaaaggacatcaccgataggcttcctaataaatttatccaggttgttaga
catgggaagaatatccattgctcaagtttggagcttgcttcactgaatgttaggaacaag
acagctgctgctgagtgcttctcgcgcacagaactttgtttggaagggcttattgacgaa
atcagaggagacattggtatccttacattgctcgcggaagtattatgtcttctggacatg
attgtaaattcttttgcgcatacaatatctacaaagcccgttgatcgctacacaagacca
gagttcacagatgatggtccaatggctatcaatgccggacgacatcctattcttgagacc
ttgcgtactgattttgttcctaacgacatctttctctctgaagcatctaatatggttctt
atcatggggccaaatatgagcgggaaaagcacatatctccaacagatatgtttaattgtc
attcttgcacaaattggctgttatgttccagctcagtttgcatccttaagagttgttgat
cgtatattcacacggattggtaacggggacaatgttgaaaacaactcgagtacgtttatg
acagaaatgaaagaaactgctttcatcatgcaaaatgttacttcaaggagcttggttgtt
gtggatgagctgggaagagcaacatcttcctcagatggattggcaatcgcatggagctgc
tgtgaataccttctttctgtgaaagcatacactgtttttgccactcatatggaacgcttg
tcagaacttgcaacaatgtatccaaatgtgaagatcctccattttgaagttgacttaaga
aatgaccgcttggatttcaagttccgcctaaaggatggcgtccgacgggtaccgcactat
gggcttctgctggccagagtagctggtatccctacttcagtgattgacacctcaacaagt
atcacttcacagatcacggagcaggaaatgacaaggatggatgccaactgcgaggagtac
cggtcgcttcagatgacgtaccaggttgtgcagcggcttatctgcctgaagtactcaaac
catgacgaagactacatccgtgaagcactgcagaatctcaaggagagctatgctgcaggc
cggctaacataa
DBGET
integrated database retrieval system
