Sorghum bicolor (sorghum): 8080745
Help
Entry
8080745 CDS
T01086
Name
(RefSeq) putative aconitate hydratase, cytoplasmic isoform X2
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00020
Citrate cycle (TCA cycle)
sbi00630
Glyoxylate and dicarboxylate metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi01200
Carbon metabolism
sbi01210
2-Oxocarboxylic acid metabolism
sbi01230
Biosynthesis of amino acids
Module
sbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
sbi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
8080745
00630 Glyoxylate and dicarboxylate metabolism
8080745
Enzymes [BR:
sbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
8080745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
8080745
NCBI-ProteinID:
XP_002460765
UniProt:
C5X9Z9
LinkDB
All DBs
Position
2:68974915..68980883
Genome browser
AA seq
979 aa
AA seq
DB search
MYRAAASPLRHSLRRLSSSYSAATPLAGAARFLAPSSEGRLSALTSSRLLGSAPCRCCSG
AGIAERPASAWRGLATMADGNSRFGHVLTSLPKPGGGEYGKYYSLPALNDPRIERLPYSI
RYLLESAIRNCDGFQITEKDVENIIDWENTAPKLVEIPFKPARVLLQDFTGVPAIVDLAS
MRDAMAQLGDDPGKIDPMIPVDLVIDHSVQADVVKSENALQANMQREFDRNKERFAFLRW
GSTAFNNMLIVPPGSGIVHQVNLEYLGRVVFNTDGILYLDSVLGTDSHTTMIDGMGVAGW
GVGGIEAEATMLGQPMSMVLPSVVGFKLTGKLRDGVTATDLVLTVTHILRKHGVVGKFVE
FYGEGMSELAVANRATIANMSPEYGATMGFFPVDHVTLGYLKLTGRSDEKVDMVEAYLRA
NKMFVDYNETQTERVYSSYLELDLADVEPCVSGPKRPHDRVALKDMKADWRACLRNKVGF
KGFGIPKEQQDKLVKFTFHGQPAEIRHGSIVIAAITSCTNTSNPSVMLGAGLVAKKACEL
GLEVNPWIKTSLAPGSGAVTKYLLKSGLQKYLDHLGFNLIGYGCTTCIGNSGELDEDVAK
AVTDNDIIAAAVLSGNRNFEGRIHALVRANYLASPPLVVAYALAGTVDIDFETEPIGKGK
NGKDVYFKDIWPSNEEIAEVEQSSVLPDMFRSTYEAITQGNPMWNQLSVPKAKRFPWDPS
STYIHDPPFFKDITPTPPGPRSIENAYCLLKFGDSITTDHISPAGSIPRDSPAGMYLLER
GVQPKDFNSYGSRRGNDEVMARGTFANIRIVNRLLNGEVGPKTIHVPTSDKLFVFDAAMR
YKADGHHTIVLAGEEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGVLPLCF
KPGEDADSLGLTGHERYTIRLPTNVSEIQPGQDVQVVTDTGKSFTCKLRIDTLVELAYFD
HGGILHYVLRNLVKQQQQQ
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtacagagcggccgcctcgccgctccgtcacagcctccgccgcctctcctcctcctat
tccgcggctaccccgctcgctggggccgcccgcttcctcgcgccctcctccgagggtcgg
ctctccgcactcacctcgtctcgcctcctcgggtcggcgccgtgccggtgctgctcaggc
gccgggatcgccgagcggcctgcgtctgcgtggcgcggactcgccaccatggctgacggt
aatagccgctttgggcatgtgctgacaagcctcccaaagcccggtggtggagagtacggg
aagtactacagcttaccagccctgaatgatcctaggatagaaagattgccatattctatc
cggtatctactggagtcagccatccgcaactgtgacggatttcagattacagagaaggat
gtcgaaaacatcattgattgggagaatactgctcccaagctggtggagatacctttcaag
cctgcccgtgtgcttctgcaggattttactggtgtcccagctatcgtagatcttgcaagc
atgcgcgatgctatggctcaactgggcgatgatcctggcaagattgatcccatgattcca
gtggatctagtcattgatcattcggtacaggctgatgtggtaaaatcagagaatgccctc
caagctaatatgcaacgcgaattcgacaggaacaaggagcgcttcgccttccttcggtgg
ggctctacggcattcaataatatgcttattgttccaccaggttcaggaattgttcaccag
gtgaatcttgaatatcttggacgagttgttttcaatacggatggcattttatatcttgac
agtgtgctgggaacggattctcacactactatgattgatggaatgggggttgctggctgg
ggtgttgggggaattgaagcagaagcaacaatgcttggtcagccaatgagcatggtcttg
cccagtgtagttggatttaaactgacagggaaattgcgtgatggtgttactgcaaccgac
ttagtcctgacagtgacacatattcttaggaagcatggtgttgttggcaaatttgttgag
ttttatggtgaggggatgagtgagttagcagttgctaacagggcaacaattgctaacatg
tcaccagaatacggtgcaacaatgggcttcttccctgttgatcatgtgacccttggatac
ctgaagctgacagggagaagtgatgaaaaggttgacatggtagaggcatatcttcgagct
aacaaaatgtttgttgattacaacgagactcaaacagaaagagtttactcatcgtaccta
gagttagatcttgcagatgttgaaccatgtgtttcaggcccgaaaagacctcatgaccgt
gttgctctgaaagatatgaaagcagactggcgtgcctgtctcagaaataaagttggtttt
aagggctttggcatacctaaagagcaacaggataaactagtcaagttcaccttccatgga
caacctgcagagattagacatggtagcattgtgatcgctgccataacaagttgcacaaac
acctcgaacccaagtgtcatgcttggtgctggccttgttgcaaagaaggcgtgtgagctt
ggccttgaggttaatccatggattaaaactagtcttgcgccaggatccggggcagtgacc
aaatatctgctgaagagtggcttgcaaaagtatttagatcatctaggtttcaacttaatt
ggatatggctgtacaacatgcattggtaactctggggagcttgatgaagatgttgctaag
gcagttactgacaacgatatcattgctgctgcagtactctctggtaacaggaacttcgaa
gggcgaattcatgcattggttcgggccaattaccttgcctcccctcctctggttgtggcc
tatgcccttgctggcactgttgatattgattttgagacggaaccaattgggaaaggaaaa
aatggaaaagatgtgtacttcaaggacatatggccatcaaatgaagaaattgcagaggtt
gagcaatcaagtgtgctgcctgacatgttcaggagcacctatgaagcaatcacacaaggc
aacccaatgtggaaccagctgtcagttcccaaggcaaagcgcttcccatgggaccccagt
tccacctacattcatgatcctccgttcttcaaggatattacaccgactccgccaggtcca
cgcagcatagagaatgcctattgcctgttgaagtttggtgacagcatcacgacagaccac
atctcaccagctgggagcatccccagggacagccctgctggcatgtacctgcttgagcgc
ggtgtgcagccaaaggatttcaattcttatggaagccgtcggggcaacgacgaagtgatg
gcacgaggaacttttgcaaatatcaggattgtgaataggctgttaaatggagaagttgga
ccgaagacgattcacgtccctacaagtgataagctcttcgtgtttgatgctgcaatgaga
tacaaagctgatgggcatcataccatagtgttggctggagaggaatatggcagtggaagt
tctcgggattgggctgccaagggaccaatgttactgggggtcaaagcagtgatcgccaag
agtttcgagaggatccaccgcagcaacctcgtgggaatgggagtgttaccgctgtgcttc
aagcctggtgaggatgctgattctctggggctcaccggtcatgagcgctacacaataagg
ctccctaccaatgtgagtgagatacaaccgggccaagatgtccaagtggtcactgacact
gggaagtcatttacctgcaagctccggattgataccctggtggagctggcttactttgat
catggcgggatccttcactacgttctgaggaacctggtgaagcagcaacagcagcagtaa
DBGET
integrated database retrieval system
