Sorghum bicolor (sorghum): 8080760
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Entry
8080760 CDS
T01086
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8080760
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8080760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
8080760
NCBI-ProteinID:
XP_021306790
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All DBs
Position
1:complement(64574689..64580347)
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AA seq
503 aa
AA seq
DB search
MSSGGGGGQQFRYAQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTKSGVGVNRNQAF
VEFTDVNQAIAMVSYFASSSEPAQIRGKPVYIQYSNRQEIVNNKSPGETAGNVLLVTMEG
VQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYTDAATASAARDALDGRSIPSY
LLPEHVTSCCLRISFSAHQDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPVVGADGRKV
EAQGNVLLASIENMQYAVTVDVLHTVFSSFGTVQKIAIFEKNGGTQALIQYPDVNTAAVA
KEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPAGVTQGVPQPPGVQATSF
GWQGNLQAAGAYAPPGAPAQSHNANGQMPNWNPGNSVYPPGPGTYPGQMYSSSSQYATSG
GFPNTPSTTPPQYAASGGFPSTPSTAPPQYAASGGFPNTPTGAPPGILPQQLHTSQQMPP
QHENQSRGTPGTSQPPPSASYYR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcggcggtggggggcagcagttccgctacgcgcagacgccgtccaaggtg
ctgcacctgcggaaccttccgtgggagtgcgcggaagaggagctcgtcgagctctgcaag
ccctttggccgtatcgtcaacaccaagagcggcgtcggcgtcaaccgcaaccaggccttc
gtcgagttcactgacgttaatcaggcaatcgcgatggtttcttactttgcatcatcttca
gaaccagcacaaatccgaggcaagcctgtttacattcagtattcaaataggcaagaaata
gttaacaacaagagtcctggagagacagctggaaatgtcttgcttgttactatggagggt
gttcaagctagtgatgtcaccattgatgtgatccatatggttttctcggcttttgggtat
gttcataaaatagccacctttgaaaaggctgcaggttttcaggcattgatccagtacact
gatgcagccactgcttcagctgctagagacgccttagatggaaggagcatcccaagttac
ttgcttccggagcatgtgacatcctgctgcctgcgaatttccttttctgcacatcaggat
ttgaacatcaagtttcagtcaaaccgcagcagggattataataatccgtatcttccaatt
aattattcagccatggatggtacattacagcctgttgttggagctgatggaaggaaagtg
gaggctcaaggcaatgttcttcttgcatcaatcgagaatatgcagtatgctgttactgta
gacgttcttcatactgtgttctcatcatttggtacagtccagaaaattgctatttttgag
aagaatgggggaacacaagctttgattcagtaccctgatgtaaatacagctgctgtagcg
aaggaagcattggaagggcattgcatctacgatggtggctactgtaagcttcacctgtca
tactctcgtcatactgatctgaatgtgaaggcacatggtgacaagagcagagattataca
attccagctggcgtaacccaaggagtgccacaaccacctggtgtacaagctacatccttt
gggtggcaaggtaaccttcaagctgctggggcatatgccccacccggtgcccctgctcaa
agccacaatgccaatggacaaatgccgaactggaatcccggcaactcagtgtatccccca
ggcccaggaacatatccaggccagatgtactcatcttcgtcgcagtatgcaacgtcaggg
ggcttccctaataccccatcaaccactccgccacagtatgcagcgtcagggggcttccct
agtaccccatccactgctccgccacagtatgcagcatcagggggcttccctaacacccca
actggtgccccgcctggcattctgccacaacagttgcacacttcgcagcagatgccgcct
cagcatgaaaatcagtcacgaggcacacctggaactagccaaccgccgccatcagcatca
tactaccgttag
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