Sorghum bicolor (sorghum): 8080816
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Entry
8080816 CDS
T01086
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8080816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8080816
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8080816
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
8080816
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
FAIM1
Motif
Other DBs
NCBI-GeneID:
8080816
NCBI-ProteinID:
XP_002465257
UniProt:
C5WZQ0
A0A921S477
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All DBs
Position
1:65718114..65721612
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AA seq
302 aa
AA seq
DB search
MMATTAYIDDSCSEVIDPPKTEVLDVVELPGDHTQHPPKPNVVVSSSVRELLECPVCLSA
MYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLEVPCKYQSFGCS
GIYPYYSKLKHESQCQYRPYSCPYAGSECTVVGDIPYLVNHLKDDHKVDMHNGCTFNHRY
VKPNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMSPVYIAFLRFMGDDAEAKNYSYSL
EVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDRKELKLRVTGRIWK
EQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacaactgcttatattgatgattcctgttcggaggttattgatcccccaaag
actgaggtactggatgttgttgagctccctggtgaccatactcagcacccaccaaaacca
aatgtggtggtgtctagcagtgtgcgtgaacttctggaatgtccagtctgcttgagtgcc
atgtatcctcctattcatcagtgctctaatggtcataccttgtgttctggatgcaaacca
agggttcataatcgttgtccaacttgtaggcatgaactgggtaatataaggtgccttgct
ctcgagaaggtggctgcatctcttgaagttccatgcaagtaccagagctttgggtgctca
ggcatttatccttactacagcaagctgaagcatgagtcacagtgccaatataggccttat
agttgtccatatgctggatctgaatgcacagttgttggtgacattccatatttggtaaat
cacttgaaagatgaccacaaagttgacatgcacaatggctgtaccttcaaccatcgctat
gtaaagccaaaccctcatgaagttgagaatgccacctggatgcttacggttttcagctgc
tttggccagtacttttgtctacactttgaagcctttcagttgggcatgtcacctgtctac
atcgccttcctgaggttcatgggagatgacgcagaagcaaagaactacagctacagcctg
gaggtagggggcactgggcgcaagatgatctggcaaggggtgccccggagcatcagagac
agccaccggaaggtccgggatagctacgacgggctcatcatccagaggaacatggccctg
ttcttctcgggcggtgacaggaaggagctcaagctgcgcgtcactgggagaatctggaag
gaacaataa
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