Sorghum bicolor (sorghum): 8080871
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Entry
8080871 CDS
T01086
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
8080871
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbi01007
]
8080871
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8080871
Enzymes [BR:
sbi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
8080871
Amino acid related enzymes [BR:
sbi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
8080871
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
8080871
Prokaryotic type
8080871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
8080871
NCBI-ProteinID:
XP_002445119
UniProt:
C5YHH1
A0A921U8T4
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All DBs
Position
7:complement(5543578..5551992)
Genome browser
AA seq
1056 aa
AA seq
DB search
MDKQPDARGAEKVAEEKQLDEKELERKLKKDQKAKEKEEKKLKAKQKEVARLQAQANSDG
AKKTEKKQRKKAVEDENPQDFIDPDTPNGQKKLLASQMAKQYSPSAVERSWYAWWESSGY
FGADPASTKPPFVIVLPPPNVTGALHIGHALTVAIEDAMIRWRRMSGYNALWVPGVDHAG
IATQVVVEKKLMRERKLTRHDIGRENFISEVLKWKDQYGGTILNQLRRLGASLDWSREAF
TMDEQRSKAVTEAFVRLHKEGLIYRDYRLVNWDCTLRTAISDIEVDHIDLKEETMLKVPG
YANPVQFGVLISFAYPLEEGLGEIVVATTRIETMLGDTAIAVHPEDERYKHLHGRYAVHP
FNGRKLKIICDAELVDPTFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINSNGG
AQFDGMPRFAARVAVIEALKEKGLYKDTKKNEMSLGVCSRTNDVVEPMIKPQWFVNCSSM
AKAGLDAVRSKKIEIIPQQYEQDWYRWLENIRDWCVSRQLWWGHRIPAWYVTLEDDLDKN
LGSNNDRWIVARNESDANLEAQKKYPGTKLRLDQDPDVLDTWFSSGLFPLTVLGWPSDTA
DLRAFYPTSVLETGLDILFFWVARMVMMGMQLGGDVPFQKVYLHPMIRDAHGRKMSKSLG
NVVDPLEVINGMSLDGLLKRLEEGNLDPNELNIARDGKKKDFPDGIAECGTDALRFALIS
YTSQSDRINLDIKRVVGYRQWCNKLWNAIRFAMGKLGDHYIPPATVDVSLMPPICKWILS
VLNKAVGKTVTSLEAYKLSDATSAIYSWWQYQLCDVFIEAIKPYFFNDSQEFESARAASR
DTLWICLETGLRLLHPFMPYVTEELWQRLPQPKDSCRKDSIMISEYPSPVEEWSNGGLEN
EMDIVLDAVNKIRSLKPPTDSNERRPAFALCRGQEIAATIQCYQSLIVFLSSISHLKILT
ENDETPADSATAVVNKDLSVYLQLQGALNADAEREKLRKKKDEIQKLQNALAQKMDASGY
REKAPQSVQEEDMRKLTALLEQLEVISEAEKKLDAN
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaacctgatgcgcggggggcggagaaggttgctgaggagaagcaacttgat
gagaaagagttagagaggaagctgaaaaaagatcaaaaggcaaaagagaaagaagagaaa
aaacttaaggcaaaacaaaaggaggtggctaggctccaggcacaagcaaactcagatgga
gcaaagaagaccgagaaaaaacaaaggaagaaagctgtcgaggatgaaaatccacaggat
ttcatagacccagacactcctaatgggcagaagaaattgctcgcatctcagatggccaag
caatacagcccaagtgcagttgagagatcatggtatgcctggtgggaatcatcaggatat
tttggggcagatcctgcaagcacaaaaccaccatttgttatagttctgccacctccaaat
gtgactggagctcttcatatcggccatgcacttacagtggctatagaggatgctatgata
cgctggcgtaggatgtcaggctacaatgctctgtgggtccctggagtggaccatgctggc
attgctacacaggttgttgtagaaaagaagcttatgcgtgaaaggaagctgacaaggcat
gacatagggcgtgaaaattttatttctgaagtactcaaatggaaagatcaatatggtggt
accatattgaatcaattgcgccggcttggggcttcacttgattggtcccgtgaggctttt
acaatggatgagcaaagatcaaaagccgtaactgaagcttttgtcaggttgcacaaggag
ggcctgatatatagagattatcgccttgttaattgggattgcacacttcgaactgcaatt
tctgacattgaggttgatcatattgatcttaaagaagaaactatgttaaaggtccctggt
tatgccaatcctgtacagtttggtgtattgatatcttttgcctatcctcttgaggaagga
cttggtgagattgttgtagcaaccaccagaatagaaacaatgctgggcgatacagcaata
gctgttcaccccgaggatgaaaggtataagcatctgcatggaagatatgcagtccacccc
ttcaatggacgaaaactcaaaataatctgtgatgctgagttagttgatcccactttcggt
actggggctgtcaagattactcctgcccatgatccaaatgactttgaggttggaaagcgt
cataaccttgaattcatcaatatattcacagatgatggaaaaataaatagcaatggaggt
gcacaattcgatggaatgcctagatttgccgctcgagttgctgttattgaggcactgaag
gaaaaggggttgtataaggacacaaagaagaatgaaatgagtttgggcgtttgttcaaga
actaatgatgtagtggaacctatgataaaaccacagtggtttgttaattgcagctccatg
gccaaggcaggccttgacgctgtaaggtcaaaaaagattgaaattattccccagcagtat
gagcaagactggtacagatggcttgaaaatatacgtgattggtgtgtctcgagacaactt
tggtggggacatcgtatacctgcatggtatgtgacactagaagatgacctggataaaaac
cttggttccaacaatgaccgctggatagttgcaagaaatgaaagcgatgcaaaccttgag
gcacagaaaaagtatccaggaacaaaattacgtctagatcaagaccctgatgtgctggac
acatggttttcatctggtcttttccccttaacagtacttggttggccgtctgataccgct
gacctccgtgctttctaccctacatcggtactagaaactggacttgatattctcttcttt
tgggtagcaaggatggtgatgatgggaatgcaacttggtggtgatgtgccatttcagaag
gtttatttacatcctatgattcgggatgcacatggccgaaagatgtcaaaatcacttggt
aacgttgttgaccctcttgaggtgataaatggcatgtcactggatggtcttctgaaacgt
ttggaagaaggcaatctggatccaaatgaactaaatatcgcaagagatgggaagaagaag
gatttccctgatggcatagcagaatgtggtaccgatgccctccgcttcgcactgatatcg
tacacttcccagtctgacaggataaatcttgatatcaagagggtggttggatacagacaa
tggtgcaacaaattatggaatgccatccgttttgcgatgggcaaactgggtgatcattac
attccgccagcaactgttgatgtgtctcttatgccaccaatctgcaagtggatactctcg
gtgcttaacaaagctgttgggaaaaccgttacttctttagaagcatacaaattgtctgat
gcaacatctgctatatactcatggtggcagtatcagctatgtgatgtatttatagaagct
atcaaaccttacttcttcaacgattctcaagagtttgaatcagcaagagctgcctccaga
gataccctgtggatttgcctggagactggtctacgcctgctccacccattcatgccctat
gtaacagaagagctctggcagcgtcttccacagcccaaagattcttgcaggaaagattca
attatgatttcagagtatccatctcctgttgaggaatggagtaatggcggacttgaaaat
gaaatggacattgtcttggatgctgtcaacaaaataaggtctctgaagccaccaacagat
tcaaacgaaagacggcctgcttttgcactttgccgagggcaagagattgctgccactatc
caatgctatcaatctctaatcgtgtttctttcttccatatcacatctcaagatcctgacg
gagaacgatgaaactccagctgattctgcaactgctgttgtcaacaaagacttgtctgtg
taccttcagctccaaggagctttaaatgcagatgctgaacgtgaaaagctaaggaagaaa
aaagacgaaattcaaaagctacaaaatgcactggcacaaaaaatggacgcctctggctat
cgcgagaaggctccacagagcgtgcaggaagaggacatgagaaagctcaccgctttgttg
gaacaactagaggtcatcagtgaagctgagaagaaattagatgcaaactga
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