KEGG   Sorghum bicolor (sorghum): 8080883
Entry
8080883           CDS       T01086                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8080883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8080883
Enzymes [BR:sbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     8080883
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     8080883
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 8080883
NCBI-ProteinID: XP_002445131
UniProt: C5YHJ3
LinkDB
Position
7:complement(5846200..5854534)
AA seq 1251 aa
MDGDQSTVVLDTDMMDCLNFDGYGDVEDPRKEGAKGERQPSGKVDELQSTMDVDLTCIAY
VEDEGNEKQNAMDVDLKEILPEEDEGKGKASSDIPSHVPVDFDVASLEKFCREASRSFFS
ATGLVSHQINSYNQFVSHGLQDLFDSLGEITVEPDYDPSNKSGAWKHATIKFGRVELSEP
VFMVDNLDLEQQDLKFKPRHARLQRMTYASRMNVEMTAQVYILDKSDKAKTGKDTHVHRR
EIMTETKQVSMGLLPVMVKSNLCWLHKLQESDCQFDFGGYFLIKGTEKVFIAEEQRFLSR
IWITDYPSWDASYLSQIKREKINIKLVPSKRNESCKVITIYFMGTIIPIWVVFFALGVSS
DKEAFDMIDILDCDASIVNIISSTIKESHEEFEGFRAPGRACQYVDKLIRKSKFPPKESF
DEYVCRYMFPSVNGVRSKALFLGYMVKCLLMAYSGNRKCDNKDDFRNKRLGLACQLLRRE
LWTHIKRAEWRMVKLMQRDLSNDGNLQDLRRYVDASIITNGLNRAFSTGSWRHPYLKARC
SGVVATLRRTNPLQMMSDLRKTRQWVAYSGAVGDARYPNPSFWGKLCFLSTPDGEKCGFV
KNLAVTAVVSSVVRKPLIDTFVSCGMKKLDDISLQDISGKDRIFLNGSLLGVCADPHELT
LRLRSLRRSKLIDPQVEIKRDKHHKEVRVLCDPGRILRPLLVVENLRRITRPKDGLYSFQ
ELIDQNIVELIGVEEEEDIQCASGIRHLFSGEKEDRSSGYTHCELDPSFLLGLSCSLIPF
ANHDNGKRVLMQAEKISQQAIGYSPTNSHTRLDTLSHQIFYPQRPLFKTVVSYGLGKAET
AYSFGRKDDFNTPEYFNGQNAIVSINVHQGFNQEDSLVLNRASLERGMFRTLHLKSYKAQ
VENKEITRRLKHRESINFGKVQSKRGKVDSLDSEGLPYVGASLQSGDIVIGKVSESGEDH
SAKLMHTEKGMVDKVVLSANDDGVNFATVTLRQSRSPCVGDKFASMHGQKGVVGLLDSQE
NFPFTCQGIVPDIVINPHGFPTRQTPGQLLEAALGKGIAMGGKVRYATPFTTPTVDVITE
QLHKAGFSRWGEESVLNGQTGERMKSLVFMGPTFYQRLVHMAEDKVKFRNTGPVHPVTRQ
PVEDKKRFGGVKFGEMERDCMLAHGAAANLHERLFTLSDFSQMHICQACQRVANVIMRPA
EGGSKKVHGPYCMFCRSAERIVRVNVPYGSKLLYQELFCMGICLKFDTEIR
NT seq 3756 nt   +upstreamnt  +downstreamnt
atggatggtgatcagtcaactgttgtcttagatactgatatgatggattgcctgaatttc
gatggctatggagatgttgaagatccccgcaaggagggtgcaaaaggggagcggcagcct
tctggcaaagttgatgaactgcagtctactatggatgtcgatttgacatgcatagcttat
gtggaagatgaagggaatgaaaaacagaatgctatggatgtggatttgaaagaaatactg
cctgaggaagatgaagggaaaggaaaggcttcttcagacataccctcacatgtaccagtt
gattttgatgttgcaagcctcgagaagttttgcagagaagcatcaagatcatttttcagt
gcaactggactagttagccatcagattaactcatacaatcaatttgtctcccatggactc
caagacctctttgattctcttggggaaatcactgtggagcctgattatgacccttcaaat
aaaagtggtgcttggaaacatgccactataaaatttggtagggttgagcttagtgagcca
gtgtttatggttgacaaccttgaccttgaacagcaagatctcaaatttaagccaagacat
gcccgcctccagcggatgacatatgcgtctaggatgaatgtagaaatgactgctcaggtt
tatatactcgacaaaagtgacaaagccaagactggtaaggatacacatgttcatagaaga
gagataatgacagaaactaaacaagtcagcatgggattgttacctgtgatggtgaagtca
aatttgtgctggctgcataaacttcaagaaagtgattgccagtttgattttggtggctac
tttttgatcaaaggaacagagaaggtattcattgctgaagagcaaagatttttatcaagg
atttggatcacagactaccccagttgggatgcaagttacctgtctcaaatcaaaagagaa
aagatcaatataaaacttgttccgtccaaacgcaatgaaagctgcaaagtcataaccatt
tacttcatgggtacgattataccaatttgggtagtattttttgcacttggtgtatcgtca
gacaaggaagcttttgatatgattgatatcctagactgtgatgcttccatagtcaacata
atatcatcaactattaaagaatctcatgaagaatttgaaggcttccgcgctccaggtaga
gcctgtcaatatgttgataagctgatcagaaaatcaaagtttccgcccaaagaatccttt
gatgagtatgtttgtaggtatatgtttcctagtgtcaatggggttaggagcaaggcactt
ttcttgggttacatggtaaaatgtctgctaatggcatactctggcaatcgaaaatgtgat
aataaggatgatttccgtaacaagaggctaggtctcgcctgccaattgcttcggagagaa
ctctggactcatattaagagagcagaatggcgcatggttaagctcatgcagagagatttg
agcaatgatggcaacttgcaagaccttaggcgttatgtggatgcgtcaattattaccaat
ggattgaatcgggctttctccactggttcttggcggcatccttatctaaaagcaaggtgt
tcaggggttgtagcaacccttcggagaacaaatccacttcaaatgatgtctgatctgagg
aagacgcgacagtgggttgcgtattctggagcggttggagatgcaagatacccgaatcca
tccttctggggaaaattgtgttttttgtccactccggatggtgaaaaatgtggatttgtg
aaaaaccttgctgttactgctgtggttagctctgtagtgaggaaaccattgattgataca
tttgtttcttgtggaatgaagaaactggacgatatttcactacaagatatttctgggaaa
gacaggatcttcttgaatggaagcttgcttggagtatgtgcagacccacatgaattgact
ttgcgtttaagaagtttgaggcgtagcaagctaattgatcctcaggttgaaatcaaaagg
gacaagcaccataaagaagttcgtgtactttgtgatccaggcagaattctaagaccactt
cttgtagttgaaaatctaagaagaatcacaagaccaaaagatggactatactcttttcag
gaacttatagatcaaaacatagttgaactgattggtgttgaagaagaggaggatatccaa
tgtgcgtctggaattagacatctattctcaggggagaaagaagacaggtcttctggctat
actcattgtgaacttgatccttctttcttgctagggttgagttgcagtctcattcccttt
gccaaccatgataatggtaagagggttctgatgcaagctgaaaaaatatcacagcaggct
attggctactcccctacaaattctcacactaggctcgacaccctttcacatcaaatcttc
tatccacaaagacccttgtttaaaactgtggtgtcctatggtcttggaaaggcagagaca
gcctacagctttggacgaaaagatgactttaatacaccagaatatttcaatggccaaaat
gcaatagtctcaatcaatgttcatcagggattcaaccaagaagattctctggtcctgaat
agggcctctttagagcgtggcatgtttcgtacactacatttaaagagctataaagcacaa
gtcgaaaacaaagagatcacaaggcgtctcaaacacagggaaagtatcaattttggtaaa
gtgcaaagcaagagggggaaggttgacagtctggacagtgagggtttaccatatgttgga
gcaagtcttcaaagtggtgacattgtcattggaaaggtctcagagtctggtgaagatcat
agtgccaaactgatgcatactgagaaagggatggtggataaggtagttctttcagcgaat
gatgatggggtgaactttgcaactgttactctaagacagtctcgctcgccatgcgttgga
gacaagtttgccagcatgcatggacaaaaaggagtggttggcctattggattcccaggag
aatttcccatttacttgccaagggatagttccagacatcgtcataaacccacatggtttt
ccaactcgtcaaactcctggtcagttgcttgaagctgctctggggaaggggattgccatg
ggtgggaaggtcaggtatgcaacaccgttcaccactccaaccgtggacgtgatcaccgaa
cagctgcacaaggctgggttttcaaggtggggcgaggagagcgtcctgaacgggcagacc
ggcgagaggatgaagtccctggtgttcatgggaccgaccttctaccagcggctggtgcac
atggccgaggacaaggtgaagttccggaacacggggccagtgcacccggtgacgcggcag
ccggtggaggacaagaagcggttcggcggcgtcaagttcggggagatggagcgcgactgc
atgctcgcccacggcgccgccgccaacctccacgagcggctcttcacgctcagcgacttc
tcgcagatgcacatctgccaggcctgccagcgggtggccaacgtgatcatgaggcccgcc
gagggcggcagcaagaaggtgcacggcccctactgcatgttctgccgctccgcggagcgc
atcgtccgcgtcaacgtgccctacggctccaagctgctgtaccaggagctcttctgcatg
ggcatctgcctcaagtttgacaccgagatccgctag

DBGET integrated database retrieval system