KEGG   Sorghum bicolor (sorghum): 8080919
Entry
8080919           CDS       T01086                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03010  Ribosome
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    8080919
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8080919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sbi03011]
    8080919
   04121 Ubiquitin system [BR:sbi04121]
    8080919
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8080919
Ribosome [BR:sbi03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    8080919
  Archaea
    8080919
Ubiquitin system [BR:sbi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   8080919
Exosome [BR:sbi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8080919
  Exosomal proteins of colorectal cancer cells
   8080919
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD Thioredox_PDIA6_C DUF2604 UBL_UBAC1 TBK1_ULD IBR Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 8080919
NCBI-ProteinID: XP_002439338
UniProt: C5Z0N6 A0A921Q894
LinkDB
Position
9:5545506..5546272
AA seq 155 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK
ECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA
NT seq 468 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacggggaagaccatcacgttggaggtggagtcctcg
gacaccatcgacaacgtgaaggccaagatccaggacaaggagggcatcccgccggaccag
cagcgtctcatcttcgccggcaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtccaccctccacctggtcctccgcctccgcggtggcgccaagaagcgc
aagaagaagacgtacaccaagcccaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtgctccagttctacaaggtggacgacgccaccggcaaggtcacccgcctccgcaag
gagtgccccaacaccgagtgcggcgccggcgtctttatggccaaccacttcgaccgccac
tactgcggcaagtgcggcctcacctatgtctacaaccagaaggcgtaa

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