Sorghum bicolor (sorghum): 8081158
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Entry
8081158 CDS
T01086
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
8081158
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbi01007
]
8081158
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbi03016
]
8081158
Enzymes [BR:
sbi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
8081158
Amino acid related enzymes [BR:
sbi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
8081158
Transfer RNA biogenesis [BR:
sbi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
8081158
Prokaryotic type
8081158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF8127
Motif
Other DBs
NCBI-GeneID:
8081158
NCBI-ProteinID:
XP_021309999
LinkDB
All DBs
Position
2:4051437..4065478
Genome browser
AA seq
964 aa
AA seq
DB search
MALARPSSALLSCSSSACIRRLNPLLLSACRRPAWAPRRAARRFCAAIASETDVFTSPEI
AKSFDFTNEERIYKWWESQGFFKPNFDRGGDPFVIPMPPPNVTGSLHMGHAMFVTLEDIM
VRYFRMKGRPALWIPGTDHAGIATQLVVEKMLAAEGVKRTDMTREEFTKKVWEWKEKYGG
TITNQIRRLGASCDWSRERFTLDEQLSRAVVEAFVRLHDKGLIYQGSYLVNWSPNLQTAV
SDLEVEYSEEPGNLYFIKYRVAGGTRDDFMTIATTRPETLFADVAIAVNPQDKRYAQYVG
KLAIVPLTCGRHVPIIADRYVDPEFGTGVLKISPGHDHNDYHIARKLGLPILNVMNKDGT
LNDVAGIYSGMDRFEAREKLWSDLVETNLAVKKELYTLRVPRSQRGGEVIEPLISKQWFV
TMEPLAEKALHAVENGQLTILPERFEKIYNHWLTNIKDWCISRQLWWGHRIPVWYIVGKK
CEEDYIVARTEEEALAKAQEKYGKSVEIYQDPDVLDTWFSSALWPFSTLGWPDLSKEDYK
HFYPSTVLETGHDILFFWVARMVMMGIEFTGSVPFSYVYLHGLIRDAEGRKMSKTLGNVI
DPLDTIKDYGTDALRFTLSLGTAGQDLNLSIERLTSNKAFTNKLWNAGKFLLQNLPDKSD
VSAWDVLLANKFDSEASLQKLPLPECWVVTGLHELIDKVSRSYDKFFFGDAAREIYDFFW
GDFADWYIEASKTRLYHSSDKFAAATAQSVLVYVFENILKLLHPFMPFVTEELWQAFPYR
KQALMVTPWPTTGLPKDLRSIKRFQNLQSLIRGIRNVRAEYSVEPAKRISASVVATADVL
EYVSKEKQVLALLSKLDVQNVNFTESAPGDANQSVHIVADEGLEAYLPLADMVDVSEEVK
RLSKRLSKMQSEYDALVARLNSPSFVEKAPEDIVRGVREKASEADEKISLTKNRLAFLQS
TIST
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcgcgcccgtcctccgcgctcctctcctgctcctcctccgcctgcatccgc
cgcctcaacccgctcctcctctccgcctgccgccgcccggcgtgggccccgcgccgcgcc
gcccgcaggttctgcgcagcgattgcctccgagacggatgtgttcacctccccggagatc
gcgaagtcgttcgacttcaccaacgaggagcgcatctacaagtggtgggaatctcaggga
ttctttaagcctaactttgaccgcggaggagatccatttgtcatcccgatgccaccacca
aatgttaccggatcactacatatgggccatgctatgtttgtcacccttgaggatataatg
gttagatatttccgaatgaaagggagacctgcactctggatacctggcactgaccatgct
gggattgcgactcagttggttgtggaaaagatgctggccgctgaaggtgtcaagaggaca
gatatgacacgagaggagttcaccaaaaaagtttgggagtggaaagagaaatatgggggc
actatcactaatcagattaggcgattgggtgcatcttgtgattggagtcgtgaacgtttc
actcttgatgaacaattgagtcgtgcagttgttgaagcatttgttagactccatgataaa
gggcttatatatcaaggatcttatttggtcaattggtctcctaacctgcaaactgcagta
tctgatttagaagtagaatactctgaagaacctggaaatttgtacttcatcaagtaccgg
gttgctggcggaaccagagatgattttatgactattgcgaccacaagacctgaaactcta
tttgctgatgttgcaattgctgttaacccacaggataagcgttatgcccaatatgttggc
aaattggctattgtaccgttgacatgtgggaggcatgtacctattattgctgaccggtat
gttgatccagaattcgggactggggtgctgaagattagccctggacatgatcataatgat
tatcatattgctcgaaagcttgggctgccaattcttaatgttatgaacaaagatggtaca
ctaaatgatgttgctggaatatacagtggtatggatcgatttgaggcccgagaaaagttg
tggtctgaccttgttgagactaacttggcagtaaagaaagaactttatacacttcgagtc
cctaggtctcaacggggtggtgaagtgattgagcctttgattagtaagcaatggtttgtt
acgatggagccattggctgaaaaggctctccatgctgttgaaaatgggcaattaaccatt
cttccggagagatttgagaagatatataatcattggctaacaaacataaaggattggtgt
ataagtagacaattgtggtggggtcatcgtataccagtttggtatattgttggaaagaaa
tgtgaagaagactatattgttgctagaactgaagaggaggcacttgcaaaagctcaggaa
aaatatggaaaatcagttgaaatatatcaagaccctgatgttcttgatacttggttctca
agtgctctgtggcctttcagcacacttggttggcctgatctttccaaggaggattataag
catttttatccttcaactgttctggagacaggccatgacattttgttcttctgggttgca
cgaatggtcatgatgggaattgagtttacaggatcagtaccattttcttatgtctatctt
catggccttatccgggacgctgagggtcgaaaaatgtcgaagacattggggaatgtcatt
gatcccctagataccatcaaagattatggcacagatgctttgagatttacactatctttg
ggcactgcagggcaggacctcaatctctctatagaaaggttgacatcaaataaggctttc
acaaacaagctgtggaacgcaggcaaatttttgttgcagaatttgcctgataaaagtgat
gtctcggcatgggatgtcttgttagcaaataagttcgactcagaagcatcactccagaaa
ctgccattgccagaatgctgggtggttacaggactacatgaactcattgataaggtcagc
agaagctatgacaagtttttttttggagatgctgctagagaaatatatgatttcttctgg
ggggattttgctgattggtatattgaagctagcaaaacacggctttaccactcaagtgac
aagttcgctgctgctacagcccagagcgttctggtgtatgtgtttgaaaacatactgaag
ttattgcatcccttcatgccatttgtgactgaagaattatggcaggcatttccatacaga
aaacaagcacttatggttactccctggcctaccactggccttcctaaggatttgaggtcc
atcaaaaggttccagaatttgcaatcattgataagaggaatcagaaatgttcgagcagaa
tattctgttgagccagctaaacggatatcagcttctgttgttgctactgcagatgtcctg
gaatatgtatcgaaggagaagcaggtcctagctttactttcaaagcttgacgttcagaat
gtaaattttactgaatcagcaccaggtgatgcaaaccagtcggttcacattgttgctgat
gagggtttggaggcctatctacctttggctgatatggttgacgtgtctgaagaggttaag
cggctctccaagcgcctctctaagatgcaatcagagtatgatgctcttgttgcacgcctc
aattcccctagttttgtagaaaaggcccctgaagatattgttcgtggagttcgtgaaaaa
gcgtctgaggcagacgagaagatctctctaactaagaatcgtcttgcttttctccaatca
accatctccacttaa
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