Sorghum bicolor (sorghum): 8081234
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Entry
8081234 CDS
T01086
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8081234
03036 Chromosome and associated proteins [BR:
sbi03036
]
8081234
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8081234
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8081234
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8081234
microRNA pathway
RISC loading complex
8081234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArgoN
PAZ
ArgoL1
ArgoL2
Piwi
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
8081234
NCBI-ProteinID:
XP_002466274
LinkDB
All DBs
Position
1:complement(3945233..3958347)
Genome browser
AA seq
1305 aa
AA seq
DB search
MSYRGGGRRGRRGDTHGRGGGGSNVWPPPSTPRPVAAQNQVTVVYRGPLLVLRHQGATGV
LPVAAAPSSTPAPPHQPALKSASTPASEPASAASSALSPAVLAKEVVRKNAFVSKTALAP
SAAAAAAAAAAAAMAAAQGTAAAGADDASDLDLSPVSKKGLAHPARPGRLATVGKKVMIR
ANHFLVNVADNNLFHYDVAINPESKSRQTNREVLNELIKLHGKTALGGAYDGRKSLYTAG
SLPFESEEFVVTLVDPEKKDKERAEREYRITIRIAGRTDFYHLQQFLRGRQRDMPQETIQ
VLDVVLRESPSWNYVTVSRSFFSTTFGHRGDIGDRLECWRGYYQSLRPTQMGLSLNIDIS
ATSFFKPVSVIKFVEEYLNMRDTSRPLSDRDRVKIKKALRGVRIETTHQQDQIRRYKITG
VTSIPMSQLIFPVDDKGTRKTVVQYFWDKYNYSLKHGSWPCLQAGSDSRPVYLPMEVCKI
LEGQRYSKKLNDRQVTNILRATCKRPQEREQSIHDMVLHNKYADDRFAQEFGIKVSSDLV
TVPARVLPPPLLKYHESGREKTCALSVGQWNMINKKMINGGTIDNWTCLNFSRMRPDEVQ
RFCMDLIHMCNATGMVVNPRPFVDVKSAAPNYIENALRDVHRRATQMLAQQGVGNQLQLL
IVILPDVKSKESVRLTLELYLSVACQSMLAGQTSNIWKMLHSKSMSRLVGATRFLSEPLY
AMAYPLCQKSQQSSLVQMSHPPPAGEDSASSIAAVVASMDWSEITKYRGLVSAQPHRQEI
IEDLFTVTKDPHKRHNVNNGMIPYAFSCAHKKGSHYLIKRKFGYALSRSKIKRVCETDIG
IVSQCCLMKHDCRPNKIFLENISLKNNAKVVASMDWPEITNCTDSDQDWHSSHDETSQEC
IRVNVILLTTKVEVIVKKYSTVEYVANHAMRGIGAKFTDVYFLCDNRSIDAGTHLGQSCT
LECRHRLRGGQISAPKRFSEFLKEEQQKSNWHEIVDIPYDLQRPPEFLDKVVGLGDPSQW
AFSMLVEALERTHNAGHSYRGVFSIDDLWYIPDFDCVEIRKKSEKCLDQKNYILDLFVIV
SIIEMHFLLVEWDLSYKYPMYLDRLVKWIHDLKETGTEYLSKVQRAVVFLNPAGWSAAKR
IQLFDSLMIHYHKLELFNDRQNFRAALGQGSSDSQYSWKYNLSEEMMNCMGTQKIYRDDY
FGLLDFTRCFFTHMERIIGSEKQADAAIYLLAKDQIIRLLNLLLIKYQPTTGALPAVGTS
SASIAIHHSAGGSVTTRQCSELSRIPRVNTLEVFHYFGFRSNPSS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccgcggcggcggccggcgaggccgccgcggcgacacccacgggagaggagga
ggaggctccaacgtgtggccgcccccttccaccccgcgcccggtggcggcgcagaaccag
gtcacggtggtctaccgcggacccctgctggttttgcggcaccagggcgcgaccggggtg
ctgccggtggcggctgcgccgtcttccactccggcgcctccacaccagccggccctgaag
agcgcctccacgccggcgtccgagccggcctcggctgcctcctccgcgctgtcgcccgcg
gtcctggcgaaggaggtggtgcggaagaacgccttcgtttccaagaccgcgctggcgccg
tccgcggctgctgctgctgctgctgctgcggcggcggccatggcggcagcgcaggggacg
gctgctgccggcgcggacgacgcgtcggatctcgacctgtcgccggtctccaagaagggg
ctcgcgcaccccgctaggccgggccgcctcgccaccgtggggaagaaggtgatgatccgc
gcgaaccacttcctcgtcaacgtcgccgacaacaacttgttccactatgatgtggctatt
aatcctgagtcaaagtcaagacaaaccaacagggaagttctgaatgaacttatcaagttg
catgggaagacagctctgggtggtgcctatgatggaaggaagagtctttatactgctggt
tcacttccttttgaatcagaggagtttgtggttacgctggttgatccagaaaagaaggac
aaagaaagggcggagagggagtacagaatcacaattcgtatcgctgggagaacagatttc
taccaccttcagcagtttctgcgcggaaggcagagagatatgcctcaagaaaccatacaa
gtacttgatgttgtcctcagggagtcgccatcttggaattatgtcacagtgtccagatcc
tttttctctactacttttggccaccgaggcgacattggcgacaggcttgagtgttggagg
ggttactaccaaagcctgcgcccgacacaaatggggctttcactgaatatagacatatca
gcaacatccttttttaagcctgtgtcagttatcaaatttgtggaggagtacctgaacatg
cgtgatacatctcggcctttgtcggacagagatcgtgtgaagataaagaaagcattacgt
ggagttcgcattgaaacaacccaccaacaggatcaaatcagaagatacaagataacaggg
gttacttccatccctatgagccagctgatatttcctgttgatgataaaggaacaagaaag
actgttgtgcagtacttctgggacaaatacaactacagcttgaagcatggttcttggcct
tgtcttcaggctggcagtgattcacgacctgtatatttgcctatggaggtttgcaaaatt
ctggaagggcagagatactctaagaagcttaatgacagacaagtgaccaacatacttaga
gcaacatgtaaacgtccccaggagagggagcagagcatacatgatatggttctgcataac
aagtatgcagatgataggtttgctcaggagtttggcatcaaagttagcagtgatctagtg
actgttccagcccgtgtgctgcctccacccctgttgaaatatcatgagtctggtagggag
aaaacctgtgcgctaagtgttggacaatggaacatgatcaataagaaaatgatcaacggg
ggaactattgataactggacttgtttgaacttttcacgcatgcgacctgatgaggtacag
aggttctgtatggatctgattcatatgtgcaatgcaactggaatggttgtcaatccacgt
ccatttgttgatgtcaaatctgcagctcccaactatatagagaatgctttgagagatgta
cacaggagagccacacaaatgcttgcccaacaaggagtgggaaatcagctgcagcttctg
atcgtaattctgcctgatgtaaaatcaaaagagtctgtgagactgacattggagttgtat
ctcagtgttgcttgccaaagcatgctagcaggccaaacaagcaatatttggaaaatgttg
cactcaaaatcaatgtcaaggttggtgggcgcaacacggttcttgagcgagcctttgtac
gcaatggcataccctttgtgtcagaagtcccaacaatcatctttggtgcagatgtcacat
ccccccccagcaggagaggactctgcctcatccattgctgctgtggtggcatcaatggac
tggtcagaaatcaccaagtatagaggccttgtttctgctcaaccacatcggcaagagata
atagaagatttgtttactgtcactaaggatccgcacaagaggcacaatgttaataatggc
atgatcccctatgctttctcttgtgcacacaagaaaggatcacattatttgattaagaga
aaatttggctatgctttgtcacgaagtaaaatcaaaagagtctgtgagactgacattgga
attgtatctcaatgttgcttgatgaagcatgattgcaggccaaacaagatttttttggaa
aatatttcactcaaaaacaatgccaaggtggtggcatcaatggactggccagaaatcaca
aactgcactgattcagatcaggattggcacagttctcatgatgaaacatcccaagaatgt
ataagggtcaatgttattctccttacaacaaaggttgaagttattgttaagaagtattct
actgtggagtatgttgctaaccatgcaatgagaggcattggtgctaagttcaccgatgtt
tactttttgtgtgacaatagaagtatagatgcaggcactcatttaggccagtcatgcaca
ttggagtgccggcaccgattaagaggtggccagatatccgcccctaagagatttagtgaa
ttccttaaggaagagcaacaaaaaagcaattggcatgagattgttgatataccatatgat
ctacagaggcctccagagtttctggacaaagttgttggtctaggtgatccatctcaatgg
gcattttctatgttagttgaggcactagaaaggactcacaatgccggccacagttatagg
ggggtgttcagtattgatgacctctggtatataccagattttgattgtgttgagattaga
aagaagagtgaaaagtgccttgatcagaaaaattatatcttagacctttttgttattgtt
tctattattgagatgcactttttgttagtagaatgggacttaagctacaagtatcctatg
tatctagaccgtctagttaagtggatacatgacctaaaagagactggtaccgagtatctc
tcaaaggtccagagagcagttgtttttctaaaccctgctggatggtcagctgctaaaagg
atccagctatttgattcgctcatgatacattaccataagttagagctgttcaatgatcgt
cagaattttagggctgctcttggccagggttcctctgactcacaatattcctggaaatat
aatctttcagaagaaatgatgaactgtatgggaactcaaaagatttatcgggatgattat
tttggactgttggactttacaagatgcttctttacacatatggagcgcataatcgggtct
gagaaacaagcagatgccgcaatataccttcttgcaaaggaccaaattatccggttatta
aatttactgctcatcaaatatcagcccacgactggggccttgccagctgtgggaacatcg
tctgctagtattgccatacaccattcagctggaggctctgtaaccaccagacagtgcagt
gaactctctcggattcccagagtcaacactcttgaagtatttcattactttgggtttcgt
tcaaacccttcgagctga
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