KEGG   Sorghum bicolor (sorghum): 8081238
Entry
8081238           CDS       T01086                                 
Name
(RefSeq) SEC12-like protein 1
  KO
K14003  prolactin regulatory element-binding protein
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8081238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8081238
Membrane trafficking [BR:sbi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    8081238
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40 EIF3I WDR55 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Ge1_WD40 NBCH_WD40 Beta-prop_DCAF12 Frtz
Other DBs
NCBI-GeneID: 8081238
NCBI-ProteinID: XP_002466278
UniProt: C5WX41 A0A921RW10
LinkDB
Position
1:complement(4044878..4048899)
AA seq 372 aa
MAGNGGEGAVGKVACAAWIRRRDDDGWPPGLSRLLVAFARGATASSPPLVDVLEFDAKAS
ALAAYESEPLARVTVGEDAADAPRAIAVHPGGRELVCATAKGCRVFNLVYKDFGIHLISR
DASPLQCVGPQKCLAFSTDGAKFAVGGEDGRLRIFHWPSLNVILDEPKAHKSFCDMDISL
DSKFLVSSSIDGSARIWNIDEGAPLINLTRSLDEKIEYCRFSRDGAKPFLFCTLVKGHDV
WTMAVDISNWKRIGYKRFSAKPISTLAISLDGKYLALGNRDGDFCAVEIKKMEVAHWSKK
VHLGFPVSSIEFCPTERVVISTSHQWGAEITKLDVPPEWKVWQIWLVLLSLFVSSAILFY
VFFKHARINLGP
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcggggaacggcggcgagggtgcggtcgggaaggtggcctgcgcggcgtggatacgg
cggcgggacgatgacggctggccacccggcctctcccgcctcctcgtggcgttcgcccgc
ggggccacggcctcgtccccgccgctcgtcgacgtcctcgagttcgacgccaaggcatcc
gcactcgccgcctacgagtccgagcccctggcgagggtcaccgtgggcgaggacgcagcg
gacgcgccgcgcgcgatcgccgtgcaccctggcggccgggagctcgtttgtgcaaccgcc
aaaggctgcagggtgtttaatcttgtttataaagacttcggtattcaccttatttcaaga
gatgcttcacctctccaatgtgttgggcctcaaaaatgtttagcattcagcactgatggt
gctaagtttgctgttggtggtgaggatgggcgtctcagaatatttcattggccaagtctc
aatgtgattttggacgaacctaaagctcacaaatccttctgtgacatggacatcagctta
gactcaaagtttttagtttcatcatccattgatggctctgcaagaatatggaacattgat
gagggggctccactaatcaatttgacaagatctttggatgagaagattgagtattgccgc
ttttctagggatggagccaaacctttcctgttttgcacacttgtaaaaggtcatgacgtt
tggactatggccgtggacataagtaattggaagagaatcggttacaaaagattttcagca
aagcccatttccacactcgcaattagcttggatgggaaatatcttgcactaggaaatcgt
gatggtgacttttgcgccgtggaaataaagaagatggaggttgctcactggagcaagaag
gttcatcttggcttcccagtttcctccattgaattttgtcctactgaaagggtagtaatc
tccacctcacatcaatggggagcagagataacaaaacttgacgtccctcccgaatggaaa
gtgtggcagatctggctggtgctcctgagcctcttcgtgtcgtcggccatcctcttctac
gtctttttcaagcacgcaaggatcaacctggggccatag

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