Sorghum bicolor (sorghum): 8081238
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Entry
8081238 CDS
T01086
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8081238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8081238
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8081238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
EIF3I
WDR55
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Ge1_WD40
NBCH_WD40
Beta-prop_DCAF12
Frtz
Motif
Other DBs
NCBI-GeneID:
8081238
NCBI-ProteinID:
XP_002466278
UniProt:
C5WX41
A0A921RW10
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All DBs
Position
1:complement(4044878..4048899)
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AA seq
372 aa
AA seq
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MAGNGGEGAVGKVACAAWIRRRDDDGWPPGLSRLLVAFARGATASSPPLVDVLEFDAKAS
ALAAYESEPLARVTVGEDAADAPRAIAVHPGGRELVCATAKGCRVFNLVYKDFGIHLISR
DASPLQCVGPQKCLAFSTDGAKFAVGGEDGRLRIFHWPSLNVILDEPKAHKSFCDMDISL
DSKFLVSSSIDGSARIWNIDEGAPLINLTRSLDEKIEYCRFSRDGAKPFLFCTLVKGHDV
WTMAVDISNWKRIGYKRFSAKPISTLAISLDGKYLALGNRDGDFCAVEIKKMEVAHWSKK
VHLGFPVSSIEFCPTERVVISTSHQWGAEITKLDVPPEWKVWQIWLVLLSLFVSSAILFY
VFFKHARINLGP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaacggcggcgagggtgcggtcgggaaggtggcctgcgcggcgtggatacgg
cggcgggacgatgacggctggccacccggcctctcccgcctcctcgtggcgttcgcccgc
ggggccacggcctcgtccccgccgctcgtcgacgtcctcgagttcgacgccaaggcatcc
gcactcgccgcctacgagtccgagcccctggcgagggtcaccgtgggcgaggacgcagcg
gacgcgccgcgcgcgatcgccgtgcaccctggcggccgggagctcgtttgtgcaaccgcc
aaaggctgcagggtgtttaatcttgtttataaagacttcggtattcaccttatttcaaga
gatgcttcacctctccaatgtgttgggcctcaaaaatgtttagcattcagcactgatggt
gctaagtttgctgttggtggtgaggatgggcgtctcagaatatttcattggccaagtctc
aatgtgattttggacgaacctaaagctcacaaatccttctgtgacatggacatcagctta
gactcaaagtttttagtttcatcatccattgatggctctgcaagaatatggaacattgat
gagggggctccactaatcaatttgacaagatctttggatgagaagattgagtattgccgc
ttttctagggatggagccaaacctttcctgttttgcacacttgtaaaaggtcatgacgtt
tggactatggccgtggacataagtaattggaagagaatcggttacaaaagattttcagca
aagcccatttccacactcgcaattagcttggatgggaaatatcttgcactaggaaatcgt
gatggtgacttttgcgccgtggaaataaagaagatggaggttgctcactggagcaagaag
gttcatcttggcttcccagtttcctccattgaattttgtcctactgaaagggtagtaatc
tccacctcacatcaatggggagcagagataacaaaacttgacgtccctcccgaatggaaa
gtgtggcagatctggctggtgctcctgagcctcttcgtgtcgtcggccatcctcttctac
gtctttttcaagcacgcaaggatcaacctggggccatag
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