Sorghum bicolor (sorghum): 8081919
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Entry
8081919 CDS
T01086
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8081919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8081919
Ion channels [BR:
sbi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8081919
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
DUF6525
Motif
Other DBs
NCBI-GeneID:
8081919
NCBI-ProteinID:
XP_002452903
UniProt:
C5XTI7
A0A921UMS9
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Position
4:65118890..65128640
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AA seq
764 aa
AA seq
DB search
MTDQERDDIPMLLRNVELPRFPLRSTSMCIPVRDDEYEEDTFVPHTGPLFVQTPTQTAPG
ISFTSRDTPDRLPRPSQGKQVSKPHAIMPEEIRGNRWSYSGQVPKNEHLMMSGPLGQCDN
PDCVNCPPACKNKRHFQRGSNALDNKIHNILYGHSGGWKKKIEQIMAYIPIMNPHAKPVQ
QWNQFFVISCLIAIFIDPLFFFLLSVRQDGNCIVLNWNFATGLAVVRSVTDAIYFLHMLL
QFRLAYVAPESRVVGAGDLVDEPKKVAIHYLCGYFFLDFFVVLPLPQVMILLVVPKVGLS
AANYAKNLLRATVLLQYVPRIIRFVPLLDGQSANGFIFESAWANFVINLLMFVLAGHVVG
SCWYLFGLQRVNQCLRDACSASTIPYCDSFIDCGRGIGSGLYRQQWFNDLGAEACFNTGN
NATFQYGIYEQAVLLTTEDSAVKRYIYSLFWGFQQISTLAGNLVPSYFVWEVLFTMAIIG
LGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEKWMSHRRLPEDLRRRVRRAERFTWA
ATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQNLYISGS
DILYQGGTVEKMVFIVRGKLESISADGSKAPLHDGDVCGEELLTWYLEHSSANRDGGKIK
FQGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFARFLRNPRVQGAIRYESPYWRTIAA
TRIQVAWRYRKRRLKRAEKSRLSEETYTSHGILTPDSFQRGQRG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccaggagcgagatgacattcccatgttgctaagaaatgttgagctaccaaga
tttcctctaagaagtacttcaatgtgtataccagtcagggatgatgaatatgaagaagac
acctttgtaccccatactggtcctctattcgttcagacgccaactcagacggcaccggga
atttcatttacaagtagagacacacctgataggcttcctagaccttcacagggaaaacaa
gtcagcaagccacatgcaatcatgcctgaagaaattagaggaaataggtggtcttacagt
ggacaggttccaaagaatgaacatttgatgatgtctggacctttggggcaatgtgataat
cctgattgtgtgaattgccctcctgcttgtaaaaataaaagacatttccagagaggttcg
aatgctttagacaataagattcataacattctttatggtcacagtggtggatggaagaag
aaaattgagcagatcatggcatacattccgattatgaacccacatgcaaagccggttcag
cagtggaatcaattctttgtcatatcatgcctgattgccattttcattgatcccctgttc
ttcttcttactatcagtacgccaggatggcaactgcatagtgttaaattggaactttgct
acaggacttgctgttgtgagaagtgtgactgatgctatttatttcctgcacatgctgctt
cagttcagactggcttatgttgcgccagagtcacgagtggtgggagctggagacttggtt
gatgagccaaagaaagttgctatacattatctttgtggttactttttccttgatttcttt
gtggtgctcccactccctcaggtgatgatactgctagttgttcctaaagttgggttatct
gctgcaaactatgctaagaatttattgcgtgccactgttcttcttcaatatgtgccccgt
atcatcagatttgtgccacttcttgatggtcagtccgccaatggattcatatttgagtca
gcatgggctaattttgtgatcaatcttctgatgtttgttttggcgggacatgtggttggt
tcatgttggtatctctttggcttacagagggttaaccaatgtctacgagatgcttgttct
gcatcaaccattccatattgtgactcctttatagactgtggacgtggcattgggagtgga
ctgtacagacagcagtggttcaatgacttgggtgcagaagcttgttttaacactggaaat
aatgctactttccaatatggaatttatgagcaagctgttttgctaactacagaagacagt
gctgtaaaacgatatatatattcattattttgggggtttcagcaaataagtaccttagca
ggaaaccttgtcccgagttactttgtatgggaagttctgttcacgatggctattattggt
ctgggactgttgctttttgcattgcttattggaaacatgcaaaattttctccaagctctt
ggaagacggagattggaaatgcaacttaggcgacgtgatgttgaaaagtggatgagccat
agacgattgcctgaagatttgagaaggagggttagacgagctgaaaggttcacctgggca
gctactcaaggagtgaatgaagaggagcttttgagtaatttacctgaagatatccaaagg
gatatacgtcgccacttctttagattccttaataaggtccgattattcaccttgatggat
tggcctatcttggatgcaatatgtgacaaattaagacaaaacttatatattagtggaagt
gacattctttatcaaggtggcactgttgaaaagatggtcttcatagtgagagggaagctt
gaaagcatcagtgcagatggtagcaaggctccattacatgatggagatgtatgtggagag
gagctcctcacctggtacttggaacactcttcagcgaatagagatggtgggaaaattaaa
ttccaaggtatgcggttggttgctatacgcacagtaagatgtttaacaaacgttgaagct
ttcgtactcagagcaagtgatctggaagaagtcacctcacagtttgctcgattcttgcgt
aatccacgagtgcagggagcgatcagatatgaatccccctactggcgaaccattgctgca
actcgtattcaagttgcatggaggtatcgaaaaaggcggctgaagcgagctgagaagtcg
aggttgagcgaagaaacctatacctcacatgggatcttgacacctgattcttttcagcgt
ggacagaggggatga
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