Sorghum bicolor (sorghum): 8082063
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Entry
8082063 CDS
T01086
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 3
Organism
sbi
Sorghum bicolor (sorghum)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_1
LRR_8
LRRNT_2
LRR_4
Motif
Other DBs
NCBI-GeneID:
8082063
NCBI-ProteinID:
XP_021316698
LinkDB
All DBs
Position
5:complement(68985597..68989771)
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AA seq
1104 aa
AA seq
DB search
MDPPLRLLPDVGRLMAALLLLAACLSACSVQAVTSAEASYIAHRQLLAMKEAGGGEGGDL
PSDFEFDDRLGAAAGSFANPRLRRAYIALQAWKRAFYSDPKGFTTNWVGSDVCKYNGVIC
VEALDDPKIMVVAGIDLNGADIAGYLPPELGLLTDLAFFHINTNRFCGIIPKSMSRLSLL
HEFDVSNNRFVGVFPYVCLEMVSLKYLDLRFNDFEGDLPPALFDKDLDAIFVNTNRFVGH
IPENLGNSTASVIVFANNAFVGCIPKSIGRMVKTLDEIIFLNNKLDGCLPLEMGLLVNTT
VIDVSGNMLVGTIPEQLSNVAKLEQLDVSRNVFTGIVHDKICELPALVNFSFAFNFFNSE
AAVCMPSDKALVNLDDRDNCLGALRPAQKTALQCAPVLARPVDCSKHVCAGYPTPGGPPE
KPPSVPEKPPSVPAKPAAPAPMPTPHTPPDVSPEPLPEPSPAPAPAPMPVATPKTPPADD
YVPTPPVPEKSAPPPKSVPETPERPKEPPPEVKPPVVASPPPAPVKSSPPPAPVASPPPP
VKSPPPAPVASPPPPVKSPPPPAPVSSPPPPVKSPPPPAPVASPPPPVKSPPPPAPVASP
PPPVKSPPPPAPVASPPPPVKSPPPPAPVSKPPPPVKSPPPPAPVKSTPPPEEHPTPPTP
VKSSPPPEKTLPPPTPTASPPPKEKPTPPSTPSKPPSTPEKPPSTPSKPPSAPEKPKPPP
SPVETLPPPSKSSSPPKEPPPTPKLSPPPVKSSPPPAPVSSPPPTPKPSPPPAPVKSPPQ
VEKKTPPPAPVSSPPPAVKSSPPPLTPKSSGPPAQVSPPPEDEEESSPPPVVKSSPPPET
PKLSPPPAPVSSPPPVVKSTPPPAPVSSPPPAPKPSPPPAPVSSPPPVVKSSPPPAPVSL
PPPAPKTLPPPAPVSSPPPEVKPPPAPKPLPPPAPVSSPPPPVKSPPPPAPVSSPPPPVK
SPPPPAPLSSPPPPVKSPPPPAPVSSPPPPVKSPPPPAPVSSPPPPVKSPPPPPAPVSSP
PPPEKSPPPPAPVSSPPPKPPSLPPPAPVSSPPPAVTPAPPKKEESTPAPPAESLPPPSF
NDIILPPIMANKYASPPPPQFQGY
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctctgcggctcctgcccgacgtcgggcgcctcatggcggcgctgctcctc
ctggccgcctgcctgtccgcgtgcagcgtgcaggcggtgacgagcgcggaagcctcgtac
atcgcgcaccgccagctgctggccatgaaagaggccggcggcggcgagggcggcgacctt
ccgtcggacttcgagttcgacgaccgcctcggcgccgccgcgggcagcttcgccaaccct
cgcctccgccgcgcgtacatcgcgctgcaggcctggaagcgcgccttctactccgacccc
aagggcttcaccaccaactgggtcggcagcgacgtgtgcaagtacaacggcgtcatctgt
gtggaggcgctggacgaccccaagatcatggtggtcgccgggatcgacctcaacggcgcc
gacatcgccgggtaccttccccccgagctcggcctcctcaccgacctcgccttcttccac
atcaacaccaaccgcttctgcggcatcatccccaagagcatgtcccggctgtctctcctg
cacgagttcgacgtcagcaacaaccgcttcgtcggcgtcttcccctacgtctgcctcgag
atggtgtcgctcaagtacctcgacctccggttcaacgacttcgagggcgacctgccgccg
gcgctcttcgacaaggacctggacgccatcttcgtcaacaccaaccggttcgtcggacac
atcccggagaacctcggcaactccacggcgtcggtcatcgtcttcgccaacaacgccttc
gtcgggtgcatccccaagagcatcggccggatggtgaagacgctggacgagatcatcttc
ctcaacaacaagctcgacggctgcctgccgctggagatgggcctgctggtgaacaccacc
gtcatcgacgtcagcggcaacatgctcgtcgggaccatcccggagcagctctccaacgtc
gccaagctcgagcagctcgacgtgtcgcggaacgtcttcaccggcatcgtgcacgacaag
atctgcgagctcccggcgctcgtcaacttcagcttcgccttcaacttcttcaactcggag
gccgccgtgtgcatgccgtccgacaaggcgctcgtcaacttggacgacagggacaactgc
ctcggcgcgctgcgaccggcgcagaagacggcgctgcagtgcgcccccgtgctcgcgcgc
cccgtcgactgcagcaagcatgtgtgcgctggctacccgacgcccggagggccaccggag
aagccgccgtcggtacccgagaagccgccgtcggtgccagccaagcctgctgcgccggcg
cccatgcccaccccgcatacaccgccggatgtatcgccagagccgcttccagagccatcg
ccggcgccggcgccggcgcccatgccggtggcgacccctaagacaccaccggcggacgat
tacgtaccaacaccacctgtaccggagaagtcagcaccgcctccaaagtctgtcccagag
acacccgagcggccaaaggagccaccgcctgaggtgaagcctccggttgtcgcctcgccg
cctccggcaccggtgaagtcgtctcctccaccagcgccagtggcatcaccaccgccacct
gtgaagtctcctccaccagctccggttgcttcaccaccaccacctgtcaagtctcccccg
ccaccagcaccagtgagctctccaccacctcccgtcaaatcacctccaccgccggcaccg
gtggcctcaccaccaccacccgtgaaatcacctcccccgccagcgccggtggcatcacct
ccgccgccagtgaaatcacctcctccgcccgcaccagtggcctctccacctccaccggtg
aaatctccaccaccgccggctcccgtgagcaaacctcctcctccggtgaagtccccacca
ccaccagctccggtgaaatcaaccccacctccagaggaacacccaacaccacctactccg
gtgaagtcatcaccgccgcctgagaagactctacctccacccactccgactgcctctcca
ccaccaaaagagaagcctactcctccatcaactccgtctaagccaccttcaactccagag
aagcctccatcaactccgtcgaagccaccttcagctccagagaagccaaaaccaccacca
tctccggttgagacactacctcctccatcaaagtcgtcttctccaccgaaagaaccaccg
cctacacctaagttatcacctccaccagtgaagtcttctccacctccagcaccagtgagc
tcaccaccacctacacctaagccatcacctccaccagctccagtaaaatcaccgcctcaa
gtagagaagaagactccaccaccagcaccagtcagctcgccacctccggccgtaaagtcg
tctccaccaccattgacgcctaagtcatcaggcccacctgcacaagtgagcccaccacct
gaagacgaagaggagagctcaccacctccagtagtgaagtcttctccaccaccggagacg
cctaagttgtcgcctccacctgctcctgtgagctcaccacctccagtggtaaagtcaact
ccaccaccggcaccagttagctcaccgccgccagcgcctaagccgtcgcctccacctgct
cctgtgagctcaccacctccggtggtaaagtcttctccaccaccggcaccagttagctta
ccaccgccggcacctaagacactacctccacctgctcctgtgagctcaccgcctccagaa
gtgaagccaccaccagcgcctaagccgttacctccaccggctcctgtgagctcaccacca
cctccggtcaagtcgccgcctccaccggcccctgtgagctcacctcctcccccagtgaag
tctcctccaccaccggcaccgctcagctcaccaccgcctccggtgaagtccccaccacca
ccggccccggttagctcaccaccacctccagtaaagtcaccaccacccccagcaccggtg
agctcgccgccacctccagtgaagtcaccaccaccaccaccggcaccggtcagctctcca
ccacccccagaaaaatctcctcctccaccagcaccggttagctctcctccaccgaagccg
ccatcactaccaccaccggccccagtaagctcgcctcctccggcggtcacccctgcccca
ccgaagaaagaagaatcaacaccagcaccaccggcagaatccctacctccaccttcattc
aacgacatcatccttccacctatcatggccaacaagtacgcatctccacctccccctcag
ttccaagggtattaa
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